| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1483 |
|---|
| Symbol | |
|---|
| ID | 8568134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1733522 |
|---|
| End bp | 1734094 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003290758 |
|---|
| Protein GI | 268317039 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000182958 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCG AGGCGTCCTG GATTGCGGCC ATGCAGTGCG GGTGTCCGCG GGCCTTCAGT
CTGCTGTACC GGGCCTATTA CGAGCGGTTG CTCGGAGTGG CCGCGCGCCG GCTGGGCGAA
GAGGCGGCGG CGCAGGATGT CGTGCAGGAC GTGTTTCTGA AACTCTGGGA GCGGCGCGCC
CACTGGAAGG TGTACGGGAA CGTCGAGGCC TACCTGCACC AGGCCGTCTG CAACCGGGTG
CGCGACTATC AGCGCCGGGC GCAGTTGCGG AAGGGGCTGG AAGTGCCGCT GGAACCCCGG
CATGACGTGA TGGGGCGAAG CAGTCCGGAA AGCCGGTTGC TCCTCCGGGA ACGCTACCGG
CTGCTCGAAG CCGAGCTGGC ACGCATGCCC CGGCGCATGC GGACGGCTTT TGTGCTTTCG
CGCTGGTACG GATACCGTCA TCCGGAGATT GCCCGCCTGA TGCACATCTC CCCGCGAACG
GTCGAGGTGC ATGTACGGCG GGCACTGCGA CGTCTGCAAC GGGCCTTGCA GGAAGATCAT
GAGGCGACCG GGGTGCACGC TCCGGTCGGC TAA
|
|---|
| Protein sequence | METEASWIAA MQCGCPRAFS LLYRAYYERL LGVAARRLGE EAAAQDVVQD VFLKLWERRA
HWKVYGNVEA YLHQAVCNRV RDYQRRAQLR KGLEVPLEPR HDVMGRSSPE SRLLLRERYR
LLEAELARMP RRMRTAFVLS RWYGYRHPEI ARLMHISPRT VEVHVRRALR RLQRALQEDH
EATGVHAPVG
|
|---|
| |