Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1482 |
Symbol | |
ID | 8568133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1730331 |
End bp | 1733486 |
Gene Length | 3156 bp |
Protein Length | 1051 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | TonB-dependent receptor plug |
Protein accession | YP_003290757 |
Protein GI | 268317038 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0024542 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCGTC AACGATTGAT GGAACGTGTC CGGCAAGCGG CCGTCGTTGC CCGGCCGGGC ACGATTGTGC TGGTTTTGCT GGGACTGCTC TGGCTGGGAA ATGTCGGGGA TGTCTATGCC CAGGTGGTCG TGTCCGGCCA GGTAACCTCG GCCGAAGACG GCCAGCCGTT GCCCGGTGTC AACATCGTGG TGAAAGGCAC AGCCATTGGC ACGGCTACCG ATCTGGACGG GCGCTATTCG TTGGCGGTGC CTTCGCCCAA CGACACGCTG GTCTTCTCGT TTGTGGGCTT TGAGACCGTC AGCGTTCCGG TAGCCGGACG CTCGGTGATC GACGTGCAAC TGCAACCGGC CGTGATCACC GGCGAAGAGG TGGTGGTGAT CGGCTACGGA ACGGTGCGGC AGCGGGAGGT CTCCGGAGCC GTCACCACGG TCAGCGCAGA GGAACTGAAT CCGCTGGCCA CGCTCTCGGT CAACCAGATG GTGCAGGGGA GGGTACCGGG ATTGAGCATG CAGGTGCGTA CCACGCAGCC CGGCGGCGGC GTCTCGGTCA ACGTGCGCGG CGCCATCTCG CCACGTGGCA ACAACACGCC GCTCTACGTG ATCGACGGTG TGCCCATCAC CGAGTACCGC CAGTCGGATC CGGGGCTTTA TGACCGGGAC CTCGGGTTCT ACGGGGGCGT GGATCGCGAT CCGCTGGCAT TTCTGAATCC TGCCGACATC GAATCGATTA CCGTGCTGAA GGACGCCGCG GCGGCAGCTA TCTACGGTTC GGCGGCCGCC AACGGCGTGG TGCTGATCAC GACGAAATCC GGGCGGGCCG GCGCCGTGCG TGTCGACTAT CGCGGCAGCT ACTCGGCGCA GCTCATGCAG GACTACTTCC CGCTGCTGAA CGCCCGCCAG TTCATGGAGG AGCAGCGGCG GCTTTCGTCC GACCGCTACC TTTTCGAAAA CGGGCTGCCT CCTTATGGCA CGCGCGATCC CGGTAGTGTG ACGCCCTACA CGCCGCTCTT TACCGACCAA GACATTCAGG CGGCCGGCGA AGGCACCGAC TGGATCGACC TGATTTCCGA AAACGGGCGC ATTATCGAGC ACAACATCGC CGTGCGTGGA GGCTCGCCCG GTACGCAGTT CTACACGTCC TTCAACGTGC AGCTCAACGA CGCCGTCCTG AAGAATTCCA CCTTCAATCG CTACAGCCTC CGGGTGAACG TCGACCAGAC GATCTCTTCC CGCGTACGGC TCAAACTCCG CACGCAGGCC ACGCGGCTGG AGGGCAACAA CGCCTCGACG GGCGCCAATG CCGGAGGGCC GGAGAAATTC AACATGATTC AGAACGCCAT GACGTTCGCG CCCACGGTAC CCGTCTATGA CGAGAACGGC AACTTTACGA AGTCCTACTA TCGCATTCAG ATGAACCCGG CCGCCTTTCT CATCATCGAC GACGACAGCC GGGTAACCTC GCTGTTTGCT GCGCCCACGC TGGAGGTGGA TCTGACCGAT CAGTTGCAGC TTACCGTCGT CGGTCAGGTT CAGGAGGAAA CCACGCTGCG TGGCTTCTAT CTGCCGCGTC GGGCCGACCA CGACGTGTTG CCCGAGGGCA TGGCGCAGAA AAGCACGAAC AGCGTCCAGA ACTACAGCGC CGAGTCGTAC CTGACCTACA CGGGACGGCT GGGCCCGGGC GACCTGACGG CCGTCGCCGG CGCCGGCTAT TACCGTGGCG GGACGGAAGG CAGCTTCATG CAGGGCGTGG GCTTTTTCAC GGACGCCTTC AGCTACCACA ACCTGGAGGT CAGCAGCGAT CGGCTCCGCA ACATCGTGGA TTCCTGGAAA AGCTCGCGCA CGAAGCTCTC GCAGTTCGCC CGCGTGAACT ATTCGCTCTA CGATCGCTAC GTGCTGACGC TGGTAGCCCG TCGCGACGGC TCGAGCATTT TCTCCGAAAA CCATAAGTGG GGTTTCTTCC CGGGCATTTC GGCCGCCTGG CTGATTTCGG AAGAGCCCTT CATGCAGAAC GTGAGCGGCC TGTCGCAGCT CAAGTTGCGC GTCAGCTACG GCGAGGCCGG CAACGAAAGC GTGCTCAGCG GCAACACGCT GCAGCTCTAC AGCGCCGGCT ATCCGTTCCT GATCGGCGCG ACCGAATACA ACGGCGTGGC CGTCTCGCAG GTGGCCAACC CGAATCTGAA GTGGGAGACG GTCCAGACGT TCAATGTCGG GCTGGACTTC GCCTTCTGGC AGTATCGGGT GCGGGGGTCG CTGGACTTCT TCGTAAAGAC GGCGCGGGAC CTGCTGGACT TCAACCCATT GCCTGTGAAC AATCCGGTAG GGCGCGTGGC CGACAACGTG GGCTCCACGC GCAGCCGGGG CTTCGAGCTG GCGCTGCACA CCGACAACCT GACGGGCTCT CGCTTCCGCT GGAATACCGA CCTGACGCTC TCCTACTACA AGAGCTACTG GGTGGAGCGG AACCCGCAGG TGCCGCTGCC ACCTTACGTG GGCGAGCACG ATCCGCTGGA CGTCATCTAC GGCTGGGAGA CGGCCGGGAT CATTCGCAGC GAGGCGGATC GTCCCGACTA TATGCCCAAT GCCAACCTGG GCAACCTGAT CTTCGTCGAC CAGAACGGCG ATGGCGTGCT GGATGCGCAG GATGTGGTCA TCCTGGGGAA CACCACGCCG CGCTGGCAAC TGGGCCTGAA CAACACGATC TCGATTGGAA ATTTCGATCT GAACGTGTTC GTCTACGGCT ACCTGGGCTT CAAGCGGTAC AACAACTTCG CGCCCAATGT CGATGCGATC TCGCAGCTTA CCACGCCAAT GAACACGACG ATCTACGCCC GGGAGATCTG GTCGACGGAC CGGCCGGACG GCACGCGGCC GGGGGTGGCG GCCAACCCCT ACGCCACGAA CAACCCGACG GGCAATACGG ATTTCGACCT GCACGATGCC AGTTTCCTCC GGCTGAGGAG CATTACGCTG GGCTACACGA TCCCCCGGCG CTGGCTGGGC GGCGTGGCTT CGACCGTGCA GCGTGCCCGG CTGTTTGTGG ATCTGCAGAA TCTGGGCGTG CTGACCGACT ATCCGGGGTT CGATCCGGAA TACACCGAGC CCAATCCCTA CCCCAAATAC ACCACCGTGA CCGTCGGGGT GGAACTGGGA TTCTGA
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Protein sequence | MGRQRLMERV RQAAVVARPG TIVLVLLGLL WLGNVGDVYA QVVVSGQVTS AEDGQPLPGV NIVVKGTAIG TATDLDGRYS LAVPSPNDTL VFSFVGFETV SVPVAGRSVI DVQLQPAVIT GEEVVVIGYG TVRQREVSGA VTTVSAEELN PLATLSVNQM VQGRVPGLSM QVRTTQPGGG VSVNVRGAIS PRGNNTPLYV IDGVPITEYR QSDPGLYDRD LGFYGGVDRD PLAFLNPADI ESITVLKDAA AAAIYGSAAA NGVVLITTKS GRAGAVRVDY RGSYSAQLMQ DYFPLLNARQ FMEEQRRLSS DRYLFENGLP PYGTRDPGSV TPYTPLFTDQ DIQAAGEGTD WIDLISENGR IIEHNIAVRG GSPGTQFYTS FNVQLNDAVL KNSTFNRYSL RVNVDQTISS RVRLKLRTQA TRLEGNNAST GANAGGPEKF NMIQNAMTFA PTVPVYDENG NFTKSYYRIQ MNPAAFLIID DDSRVTSLFA APTLEVDLTD QLQLTVVGQV QEETTLRGFY LPRRADHDVL PEGMAQKSTN SVQNYSAESY LTYTGRLGPG DLTAVAGAGY YRGGTEGSFM QGVGFFTDAF SYHNLEVSSD RLRNIVDSWK SSRTKLSQFA RVNYSLYDRY VLTLVARRDG SSIFSENHKW GFFPGISAAW LISEEPFMQN VSGLSQLKLR VSYGEAGNES VLSGNTLQLY SAGYPFLIGA TEYNGVAVSQ VANPNLKWET VQTFNVGLDF AFWQYRVRGS LDFFVKTARD LLDFNPLPVN NPVGRVADNV GSTRSRGFEL ALHTDNLTGS RFRWNTDLTL SYYKSYWVER NPQVPLPPYV GEHDPLDVIY GWETAGIIRS EADRPDYMPN ANLGNLIFVD QNGDGVLDAQ DVVILGNTTP RWQLGLNNTI SIGNFDLNVF VYGYLGFKRY NNFAPNVDAI SQLTTPMNTT IYAREIWSTD RPDGTRPGVA ANPYATNNPT GNTDFDLHDA SFLRLRSITL GYTIPRRWLG GVASTVQRAR LFVDLQNLGV LTDYPGFDPE YTEPNPYPKY TTVTVGVELG F
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