| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1479 |
|---|
| Symbol | |
|---|
| ID | 8568130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1724840 |
|---|
| End bp | 1727245 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Beta-galactosidase |
|---|
| Protein accession | YP_003290754 |
|---|
| Protein GI | 268317035 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.988744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCACG CTTTCTGTCT GCTGGTCATT TCGTTCCTGT TGTCTGTTGC CAGTACGGCC
AGTGCGCAAC AGATCTACAC GCTGGACGTG CGTCCGGCTC ATGTGGACAT CCGCCGCGGC
CATCTGCGCA TGGGCGGTTC CAGTCCACGG GGCGACACGA TCGGCGTCAA CAGTTTTTAC
CTGGAATACA ACGGACGCCC GTGGTTTCCG CTGGTCGGCG AGTTCCACTA CGTTCGCTAC
CCGTCCGCGT CGTGGGACGA GGAGCTGCGC AAGATGAAAG CCGGAGGCAT TCAGGTTGTG
GCCACCTACG TGTTCTGGAT CATCCATGAG GAGACCGAAG GGCATTTCGA CTGGACGGGC
AACCGCAACC TGCGTCATTT TCTGGAGCTG GTGGCGAAAA ACGGCCTGTG GGCCATCGTG
CGGGTGGGGC CGTTCATCCA CGCGGAAATC CGCAACGGCG GCCTTCCCGA CTGGCTCTAC
GGCCGGCCTT TCCGGGTGCG TTCGAACGAT CCGGAATATC TGGCCTATGT GGCCCGCTAC
TACCGGGAGA TCGCCCGTCA GCTCGAGGGG CTGTACTTCA AGGACGGTGG TCCGATCATC
GCCATCCAGC TCGAAAACGA ATACGAGCAT TCGGCGGCGC CCTGGGCCTT CTCGTATCCG
GACCAGCCGC CCGAATGGAC CGCCTCGGCT TCCGATCCCG GCGTGCCGGG CTCGGAGCAC
ATACGTCGGC TGAAACAACT GGCCCGGGAG GCCGGCATGG ACGCGCCGCT CTACACGGCC
ACGGGATGGG GCAACGCCGC CATCGCTCCC CTGGAGACGC TGCCCGTCAA CTCGGCCTAC
CCCTATCCCA CCTGGGCGCC GATTCAGCCC TCGCCGCTGT ATCTGTTCCG TAACCTGCAG
CAGACGCCCG ACTATGCACC GGTCAGCTAC GATCCTTCGC TGTACCCGGT GCTCGGTGCC
GAGCTGTTCG GGGGCATTCA GGTAACCTAC ACCCGACGCC CTACCATTCC ACCTCGAAGC
CTGGAGGCTC AGATCGTACG ACAGCTCGGT AGCGGTGCCA ACGGCATCGG CTACTACATG
TACCACGGCG GCGCCACCCC GCGCGGCCGC TTTTTCTACT TCAGCGACGA AGCGATCGGC
GTACCACGCA TCAACTACGA TTTCCAGGCA CCGATCGGCC AGTACGGCCA GCTACGTCCC
TCCTTCCATT ATCTCAAATT GCTACACTTC TTTCTGCAGG ACTACGGTGC GCGGCTGGCG
CCGATGGCCG TCGTCCTTCC CGAAACGGCC ACGCAACTGC GTCCGACGAC CACCGACACG
CTGCGCTATT CGGCCCGCTC GGATGGCACC GGCGGCTTTC TCTTCATGCA CAACTTTCAG
GATCACGTCG CCATGCACGA CCTGACCGAC CTGCAACTGA TCGTCTACAC CCGGCGCGAC
ACGCTCGTCA TTCCCCGAGC GGGCACGTTC ACGCTGAAGG CGGAAGCCTC GGCCATTCTG
CCTTTCAACC TCCCGATCGG TGATCTCTGG CTGCGGTATG CCACGGCCCA GCCACTGGCC
GTGTTGCACG TGCGCGACAC GCTGCACCAC GCTTTTGTCG CCCTGGAGGG CATTCCGCCC
GAATTCGCCT TTGCACAGGC CACGCTCCAG GAGCTGAACG CCGGCGACTG CCGGCTCGAT
ACGACACCCG GAACGGCCTA TGTGCACTGC CCGGCCGACC GTCCGGCCAC CTTCACCGCT
ATCGATCGGA GCGGCCGCCC CATCGTTTTC GCGCTGTTTC CAAAACAGAT GGCGCTCAGC
GCCTGGCGGC TCACGCTGGA CGACGGCTCG TACCCGGCCT TTTCGGAAGC CACCGTGCTG
GTGCACGACG CGCTGCACGA ACTGCAACTT GAAGACACGT CGGCCGTCAC GCTGGCGCTG
TACCCGAAGC GGCTACGGCC GCCCCGGGTG CGACCGGGCA CCGTTTCGGT GACGGCACCG
CCCCATCCGG CCCTTTCGGC CTACCGGGTC ACGGTGCCGG CCGTGCGCCC CGAGGTGCAG
GTGGAGCGCG TGCGTCGCGA TCGCCTTGTG CTGCGCGTCG GACAGGAGCG CCTGCCGGAG
CCGCTGCACG AAGTGTTCGT CGACATCGAC TACGTAGGCG ACACGGGCAT GGCCTTCATC
GACGGCCAGC TCGTGGACGA CCACTTCTAC TACGGCCGGC CCTGGCGTAT CGGGCTGAAG
CGATTCTGGA GCCGGCTTGC CCGCCACGAA ATGTACTGTT ACTTCCGACC GCTGTACCCC
GACGCGCCCT TCCTGGACGA TCTACCGCCC GAGGCCATCC CGGATAACCT GCGCGATCCC
GAGCAGACGC TGCAGATCCG GGCCATCCGC ATCGTGCCGG TCTTTCGAAC TTACGTGGCT
TTCTGA
|
|---|
| Protein sequence | MRHAFCLLVI SFLLSVASTA SAQQIYTLDV RPAHVDIRRG HLRMGGSSPR GDTIGVNSFY
LEYNGRPWFP LVGEFHYVRY PSASWDEELR KMKAGGIQVV ATYVFWIIHE ETEGHFDWTG
NRNLRHFLEL VAKNGLWAIV RVGPFIHAEI RNGGLPDWLY GRPFRVRSND PEYLAYVARY
YREIARQLEG LYFKDGGPII AIQLENEYEH SAAPWAFSYP DQPPEWTASA SDPGVPGSEH
IRRLKQLARE AGMDAPLYTA TGWGNAAIAP LETLPVNSAY PYPTWAPIQP SPLYLFRNLQ
QTPDYAPVSY DPSLYPVLGA ELFGGIQVTY TRRPTIPPRS LEAQIVRQLG SGANGIGYYM
YHGGATPRGR FFYFSDEAIG VPRINYDFQA PIGQYGQLRP SFHYLKLLHF FLQDYGARLA
PMAVVLPETA TQLRPTTTDT LRYSARSDGT GGFLFMHNFQ DHVAMHDLTD LQLIVYTRRD
TLVIPRAGTF TLKAEASAIL PFNLPIGDLW LRYATAQPLA VLHVRDTLHH AFVALEGIPP
EFAFAQATLQ ELNAGDCRLD TTPGTAYVHC PADRPATFTA IDRSGRPIVF ALFPKQMALS
AWRLTLDDGS YPAFSEATVL VHDALHELQL EDTSAVTLAL YPKRLRPPRV RPGTVSVTAP
PHPALSAYRV TVPAVRPEVQ VERVRRDRLV LRVGQERLPE PLHEVFVDID YVGDTGMAFI
DGQLVDDHFY YGRPWRIGLK RFWSRLARHE MYCYFRPLYP DAPFLDDLPP EAIPDNLRDP
EQTLQIRAIR IVPVFRTYVA F
|
|---|
| |