Gene Rmar_1469 details

Gene Information

• Locus tag: Rmar_1469
• ID: 8568120
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1711814
• End bp: 1713976
• Gene Length: 2163 bp
• Protein Length: 720 aa
• Translation table: 11
• GC content: 67%
• Product: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
• Protein accession: YP_003290744
• Protein GI: 268317025

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACCA TGACCGAACA GACGCAACCG GCCATTCGCT ACGAGCGCGA CGCCGACGGG 
ATCGTCACGC TGACGATGGA CATGCCGGGG CGCTCGGCGA ACGTGATCAA CGAAGTGCTG 
GCCGAAGCGC TGGCGGCCGC GCTCGATCGG CTGGAACAGG AAAAAGACGC CATCAGCGGC 
GTGATCCTGA CTTCGGCCAA GTCCACGTTT CTGGCCGGGG CCGATCTGGA AGGGCTGCTG 
GCGTTGCGCG ATCCGGCCGA GGCGTTCCGC CGCGCCGAGC AGTTCAAGGC GCTGCTCCGG 
CGCCTGGAGA CGCTGGGGCG TCCCGTGGTG GCCGCCATCA ACGGGACGGC GCTCGGCGGC 
GGCATGGAGC TGGCGCTGGC CTGCCACCGG CGCATCGTGC GCGACGATCC ATCCATCCGA 
CTGGGCTTCC CGGAGGTGAC GCTCGGCCTG ATTCCCGGGG GCGGCGGCAT CACCCGGCTG 
GTGCGGCTGC TGGGGCTGGA GGCGGCCCAT CCTTACCTGA TCGAAGGCCG CCAGGTATCG 
CCTCGCGAAG CGCTTGCGGC GGGTCTGGTG CATGAGCTGG CCGAAAGCAA TGAAGCGCTG 
CTGGAAAAGG CCCGCGCCTG GATCCGTTCG CGACCGGATC CCACGCAACC CTGGGATCGG 
CCGGACTACC GGATGCCGGG CGGCGATCCC CGTCATCCGC GCATGATGCA GATGCTGGCC 
GTGGCGCCGG CCATACTCCG CAAGCAGACC TGGGGCAACT ACCCGGCACC CGAGGCCATC 
CTGAGCGCCG CCGTCGAAGG CGCGCTCGTG ACGTTCGACA CGGCCAGCCG CATCGAGTCG 
CGCTACTTCG CCCGCGTGGC CACCGGCCAG GTGGCGAAGA ATATGATCCA GACGTTCTGG 
TTTCAGCTCA ACGAGATCAA CAGGGGGCGC AGCCGTCCGG CCGGAATTCC GCCCACCGAT 
ACGAAAAAAG TCGGCGTGCT CGGGGCCGGT CTGATGGGGC ACGGCATCGC CTACGTGACG 
GCCCTGGCGG GCATGGAGGT GGTGCTGAAG GACCTGACGC TGGAAAAGGC CGAGGCCGGC 
AAGGCCCGCA TCGCGAAGCT GCTCGACGAA CGCGTGGCGA AGGGACGTCT CTCGCCCGAA 
GAGAAGCAGG CCGTGCTCGA CCGCATTCGC ACGACCGACC GCGTCGAAGA CCTGGCCGGG 
TGCGATCTGG TGATCGAGGC GGTCTTCGAA AACCGAGACG TCAAGGCGCA GGTCATCCGC 
GAAACCGAAG CGGTACTGCC CGAAGACGCC GTTTTCGGCT CGAATACCTC GACGCTCCCC 
ATCACCAGCC TGGCCGCCTA TTCCCGGCGC CCGGACCGGT TCGTGGGCAT TCACTTCTTC 
TCGCCGGTGC ATCGCATGCG GCTTGTCGAG TTGATCCGCG GGCGCCAGAC CTCGGACGAG 
GCGCTGGCGA AGGCGTTCGA CTACGTACGC AAAATCGGCA AGACGCCGAT CGTGGTGAAC 
GACAGCCGCG GCTTCTACAC GTCGCGCGTC TTCGGCACCT ACCTGAACGA AGGGCTGGCG 
CTGCTGGCCG AAGGGCAGCA TCCACGCGCC ATCGAGGTGG CGGGCCGCCA GGCGGGTATG 
CCCATCGGAC CGCTGGCCGT GGCCGACGAG GTGAGCCTGC AGCTCATGGA GCACATCCGC 
GAGCAGACTG AGAAAGACCT GGCCGCCGAG GGCAAGACGC TCCCGCCGCA TCCAGCCTAT 
CGGGTGCTCG ACGTGATGGT GCGTGAGCAC GGCCGGCTCG GTAAGGCGCA CGGTGCGGGC 
TTCTACGAAT ATCCGAAAGA CGGCCCCAAA TACCTGTGGC CGGAGTTGCG ACGGCTCTTC 
CCGCCGCAGG GTGAGCCGCT GCCGCAGCAG GAGATGATCG ACCGCCTGTT GTTCGTGCAG 
GCGCTGGAGA CCGTACGCTG TCTGGACGAA GGCGTGCTCA CTTCGGTGGC CGACGCCAAC 
ATCGGGAGCG TATTCGGCTG GGGTTTTGCG CCGTTTCACG GGGGTACGCT CCAGTTCATC 
AACGCCTACG GCCTGGAGCG CTTTGTGGCA CGGGCCGAAG CACTGGCCGA GCGCTATGGC 
GAACGATTCA TGCCGCCGGA GCGTCTTCGC GACATGGCCC GCCGCGGTGA AGTGTTTGCC 
TGA 

 

Protein sequence

MTTMTEQTQP AIRYERDADG IVTLTMDMPG RSANVINEVL AEALAAALDR LEQEKDAISG 
VILTSAKSTF LAGADLEGLL ALRDPAEAFR RAEQFKALLR RLETLGRPVV AAINGTALGG 
GMELALACHR RIVRDDPSIR LGFPEVTLGL IPGGGGITRL VRLLGLEAAH PYLIEGRQVS 
PREALAAGLV HELAESNEAL LEKARAWIRS RPDPTQPWDR PDYRMPGGDP RHPRMMQMLA 
VAPAILRKQT WGNYPAPEAI LSAAVEGALV TFDTASRIES RYFARVATGQ VAKNMIQTFW 
FQLNEINRGR SRPAGIPPTD TKKVGVLGAG LMGHGIAYVT ALAGMEVVLK DLTLEKAEAG 
KARIAKLLDE RVAKGRLSPE EKQAVLDRIR TTDRVEDLAG CDLVIEAVFE NRDVKAQVIR 
ETEAVLPEDA VFGSNTSTLP ITSLAAYSRR PDRFVGIHFF SPVHRMRLVE LIRGRQTSDE 
ALAKAFDYVR KIGKTPIVVN DSRGFYTSRV FGTYLNEGLA LLAEGQHPRA IEVAGRQAGM 
PIGPLAVADE VSLQLMEHIR EQTEKDLAAE GKTLPPHPAY RVLDVMVREH GRLGKAHGAG 
FYEYPKDGPK YLWPELRRLF PPQGEPLPQQ EMIDRLLFVQ ALETVRCLDE GVLTSVADAN 
IGSVFGWGFA PFHGGTLQFI NAYGLERFVA RAEALAERYG ERFMPPERLR DMARRGEVFA