Gene Rmar_1429 details

Gene Information

• Locus tag: Rmar_1429
• ID: 8568080
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1666594
• End bp: 1668681
• Gene Length: 2088 bp
• Protein Length: 695 aa
• Translation table: 11
• GC content: 57%
• Product: two component regulator propeller domain protein
• Protein accession: YP_003290704
• Protein GI: 268316985

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.191766
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAGGCT CGGTTTTACT GCTCGCTCTT CTGCTGAGTC TGACGGCCCA GGCCCAGCGC 
CCTGAATGGA AGCATTTTGT CGGAAGGCAA ACGATTGCAA CCCTGGCGGT GGGCCAGGGA 
AAACTCTGGG CAAGTACAGT TGAGGGCTTT TTGCTCCAGA TCGACACGGA GGCCAGAACG 
CAGACCCTGC AATACATATC CGATACGGGG TTACCCGCAA ATTACTTTCG CGTGCTGGGA 
ATTGATCGGT CCGGAAGACC CTGGGTGTGG GTAAGGAGGT ATGGCCTGTT TGTTTACGAG 
GATGGACAAT GGGAGAACCG AACGCCCGAT CAGATTCCTG AAGATGATAC ATTTGACGCA 
TTTTTCGTCG ACAGCGAAGG GCATGTATGG ATAGGAGGCC GGGGAAGTGT GGCGCGTTAT 
GACGGGGACT CCTGGAAGAT ATACCGGAGT GGAATTCCCC AATTCAGTGT ACGCGCACTA 
ATCCGTGATA CGCCGGGGCA TCTGTGGATA GGCGTAGGGT CTCTGGTAGC TCTGTTCGAC 
GGCGCACGGT GGCGCTATTT TGATTTTACC GATTCGCTTG GTGGAGGTAT TGTCTCTTCT 
CTGGCGATAG ACCAGACGGG ACATATCTGG GCAGCGATCA ACGGAAAGGG CGTGGCCGTA 
TTCAGGGATA GCTCCTGGAC GGTTTACACG CCTGAAAATT CTGATCTTCC CAACCGCTGG 
GTACATCAGG TGCTCGTGGA TAGTCGGGGG CGTGTCTGGG TTAATGCCGA AAAAGAGCTG 
GTCATGTTCG ATGGCTTTGC GTGGCATCGT TATACCGAGG CGCTGAATCT GGAGCGACTC 
GGGAAAAATA TGATTGCCCT TGATGAAAAC GATCGGCTCT GGATCGGAAC GCACTATGGA 
GTGCTGGAAA TAGGCGACAC CTATCATCAC ATGCATTATG TAGGCGATTC TACTCTGGTA 
GGGACGTCAT TTTCGGCGCT TGCCGTTGAT CAGCAAGGAA GGGTGTGGGT AGGAGGGAAT 
GATGGCCTTT TTGTTTTTGA TGGAAACGGC TGGACCAATC CCAATCCAGA GCTTACGTGG 
ATCAGTGTGC TGGCGGTAGA CGCTCAGGGG CGAATCCTGG TAGGGACGCA TACGGAAGGA 
TTGGCCGTGT ATGATGGGAG CAGATGGACG CAGTACGTCC AGGAGCTTCC GGACTATCAG 
GTGCTTTCGC TGGCGGCAGA TCAGACGGGC AAAATCTGGG CGGGCTTGTT CAGAGGCAAG 
GTGGTTACCT TTGATGGTGC AGACTGGACG GTGTACGATT CCACCAACAG CCCGATTCCT 
CCGGCACCTA TCTATGCGCT GGCAGTCGAC AGGAGTGGCA CGGTGTGGAT CGGCACCAAC 
GACAGGCTGA TCACTTTTGA CGGCACCGAC TGGCAGGTCT ATACTGCTGC AGATCTAGGG 
GGGCAGCCTG GTGCTATTCG TCAGATTCTT CCCGACGAAG CAGGGCGCAT CTGGGTGGCT 
ACCTCGGGGG GACTGATGTG CTTTGACGGC AGCACATGGA CCCGCTATAC GTCCCGCAAT 
ACCGGCCTGC CACGTGCGCA TGTTGAAGCG ATAGCCAGGG ACGCGGACGG GCAACTCTGG 
CTCAGCGTCG GTAGCACCCT TGCGGTTTTT GACGGGGTGT TCTGGGAGTT TATTCACCCT 
CCCCTTGCGC ACTATGCAAA AATAGTGGAA TGGACGAGGG CGCTTGCCGT AGATGCCTCC 
GGACATATAT GGATTGCCGG GGATGGGCTG CTCGTCTATC GAAAAGGTGG CGTATTGCTG 
CAGGAGATGC CGTCGCCCGA GGTGCCCGAC CGGTCGCTGC TGACCAGTTT CCCCAACCCG 
TTCACCACGC AGACCACCAT CACGTTCGAA TTGAACAGGC CCGGGCGTGT TCGGCTTGCC 
GTGTTCGATG TGCTGGGGCG TGAGCTGCAG GTGTTGCTCG ACGGCCCGGT GACGCCGGGA 
CGCCACGCCG TGGTGTGGGA CGCGAGCGGC TATCCGTCCG GTGTCTATCT CTACCGATTG 
ACCGTGAACG GCCGGTCGCT CACAGGTAAG ATGCTGCACC TTCGCTGA 

 

Protein sequence

MRGSVLLLAL LLSLTAQAQR PEWKHFVGRQ TIATLAVGQG KLWASTVEGF LLQIDTEART 
QTLQYISDTG LPANYFRVLG IDRSGRPWVW VRRYGLFVYE DGQWENRTPD QIPEDDTFDA 
FFVDSEGHVW IGGRGSVARY DGDSWKIYRS GIPQFSVRAL IRDTPGHLWI GVGSLVALFD 
GARWRYFDFT DSLGGGIVSS LAIDQTGHIW AAINGKGVAV FRDSSWTVYT PENSDLPNRW 
VHQVLVDSRG RVWVNAEKEL VMFDGFAWHR YTEALNLERL GKNMIALDEN DRLWIGTHYG 
VLEIGDTYHH MHYVGDSTLV GTSFSALAVD QQGRVWVGGN DGLFVFDGNG WTNPNPELTW 
ISVLAVDAQG RILVGTHTEG LAVYDGSRWT QYVQELPDYQ VLSLAADQTG KIWAGLFRGK 
VVTFDGADWT VYDSTNSPIP PAPIYALAVD RSGTVWIGTN DRLITFDGTD WQVYTAADLG 
GQPGAIRQIL PDEAGRIWVA TSGGLMCFDG STWTRYTSRN TGLPRAHVEA IARDADGQLW 
LSVGSTLAVF DGVFWEFIHP PLAHYAKIVE WTRALAVDAS GHIWIAGDGL LVYRKGGVLL 
QEMPSPEVPD RSLLTSFPNP FTTQTTITFE LNRPGRVRLA VFDVLGRELQ VLLDGPVTPG 
RHAVVWDASG YPSGVYLYRL TVNGRSLTGK MLHLR