Gene Rmar_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1401 
Symbol 
ID8568052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1635449 
End bp1636729 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content66% 
IMG OID 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionYP_003290678 
Protein GI268316959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCAAC CGGTATCCGC AGAAGCTCCC GCGTTCGAAC ACCTGACGCC TCCGGCAGAA 
GGCGCCCGCA TCCAGAAGCG CCCCGACGGC ACGCTGGACG TGCCGGATCA GCCGATCATT
CCCTTCATCG AAGGGGACGG CACGGGGCCC GACATCTGGC GGGCTGCCCA GCTGGTCTTC
GACGCGGCCG TCGAAAAAGC CTACGGCGGC CGCCGCAAGA TCGTCTGGTT CGAGGTCTTC
GCCGGCGAGA AGGCCTACAA CCAACTCGGC ACCTGGCTGC CCGAGGACAC GCTGAAGGCC
ATCGACTACT ATCTGGTGGC CATCAAGGGA CCGCTGACCA CGCCGGTGGG CGGTGGCATC
CGCTCGCTGA ACGTGGCGCT CCGCCAGCAG CTCGACCTGT ACGCCTGTGT GCGGCCGGTG
CGTTACTTCC CGGGCGTGCC CTCGCCGGTC AAGCACCCCG AGCTGGTCGA CATGGTGATC
TTCCGGGAAA ACTCGGAAGA TGTCTACGCG GGCATCGAAT TTCCGGCCGG CTCGCCCGAG
GCGCAGAAGC TCATTCGCTT CCTGCAGGAA GAGCTGGGCG TCACGAAAAT CCGCTTCCCG
GAGACCAGCG GCATCGGCAT CAAGCCGATC TCGCGCGACG GTACGCGTCG GCTGGTACGC
GCCGCCATTC GCTACGCCAT CGAGCGGGGC CGAAAGAGCG TCACGCTCGT ACACAAAGGC
AACATCATGA AGTTCACGGA AGGCGCCTTC CGCGAATGGG GTTACGAGCT GGCCCGCGAG
GAGTTCGGCG CCCGTCCGCT CGACGGCGGT CCCTGGCACG TGATCGAGCA CGACGGGCGG
GAAATCGTGA TCAAGGATGT GATCGCCGAC GCCTTCCTGC AGCAGATCCT GACGCGCCCG
GCCGAGTACG ACGTGATCGC CACGATGAAC CTGAACGGTG ACTACATCTC CGACGCGCTC
GCGGCGCAGG TGGGCGGCAT CGGGATCGCA CCGGGCGCCA ACATCAACTA CGAGACCGGC
CACGCCGTCT TCGAGGCCAC CCACGGCACG GCGCCCAAGT ATGCCGGGCA GGACAAGGTC
AATCCCAGCT CGGTCATCCT CTCGGGCGAG ATGATGCTCC GCTACATGGG CTGGCACGAG
GCGGCCGACC TGATCATCCG GGGCATCGAG CGCACGATCG CGCAGAAGCG CGTCACCTAC
GACTTCCACC GCCTCATGGA AGGCGCCACG CTGCTCCGGA CGAGCGAGTT CGGACAGGCC
ATCGTGGAAA ATATGGACTG A
 
Protein sequence
MAQPVSAEAP AFEHLTPPAE GARIQKRPDG TLDVPDQPII PFIEGDGTGP DIWRAAQLVF 
DAAVEKAYGG RRKIVWFEVF AGEKAYNQLG TWLPEDTLKA IDYYLVAIKG PLTTPVGGGI
RSLNVALRQQ LDLYACVRPV RYFPGVPSPV KHPELVDMVI FRENSEDVYA GIEFPAGSPE
AQKLIRFLQE ELGVTKIRFP ETSGIGIKPI SRDGTRRLVR AAIRYAIERG RKSVTLVHKG
NIMKFTEGAF REWGYELARE EFGARPLDGG PWHVIEHDGR EIVIKDVIAD AFLQQILTRP
AEYDVIATMN LNGDYISDAL AAQVGGIGIA PGANINYETG HAVFEATHGT APKYAGQDKV
NPSSVILSGE MMLRYMGWHE AADLIIRGIE RTIAQKRVTY DFHRLMEGAT LLRTSEFGQA
IVENMD