Gene Rmar_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1392 
Symbol 
ID8568043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1625925 
End bp1627469 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content66% 
IMG OID 
ProductCarboxypeptidase Taq 
Protein accessionYP_003290669 
Protein GI268316950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.04918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA CAAGTCCCTT TGCGATCCAT CCGGCGCTGG CCGAGCTGTG TGCGCACCTG 
GCGCGCATGA TGGACCTCCG GGCGGCGGCC GCCCTGCTGG AGTGGGATCA GGAGACCTAC
ATGCCCGCCG GAGCGACCGC CGTGCGGGCC GAGCAGCTCG GCACGTTGCA TCGCCTGGCC
CACGAGTGGT TCATCGCGGA GCGGACGGGC GAGTTGCTGG AAGCGGCCGC GGCCTCCGTG
CGTGAGCTTC CTCCGGAGCA CCTGGCCGTA CGGCTCGTCG AGGTCGTGCG CGAGGATTAC
GACAAAGCGC GACGGGTGCC GCCCGAGCTG GTGGCCGCGC TGGCCCGCAC CGAGTCGGAG
GCCCGCGAGG CCTGGAAGCA GGCCCGCCAG GAGAACCATT ACGCGGTGTT TGCGCCCTAT
CTGGAGCGGC TGCTGGCGCT CAACCGGGAA AAGGCCGAGG CGCTGGGGTA CGAAAAACAT
CCCTACGACG CCCTGCTGGA CCAGTACGAG CCGGGCATGA CCACCGAGGC GGTGCGCGTC
CTTTTCGAGC AGTTGCGCGC CGAGCTGGTC CCGCTCGTTC GGGCGCTTGC CGACCAACCC
CAACCCGAAG CGGCCTTCCT GCACCGCTAC GTCGAGCCCG AGCGCCAGTG GGCCCTGAAC
CGCATGGTGC TGGAAGCCAT TGGCTTCGAT CTGCAGCGCG GGCGGCTGGA CGCCTCGGTC
CACCCGTTCA GCACCGGGAT TGCCATTGCG GACGTGCGGC TGACCACCCG CATCGATCCG
CACGACTTCG CCAGCGGACT GTTCGCCACG CTGCACGAGG CCGGACACGG ACTCTACGAG
CAGGGGATCG ATCCCGTACT TGAGCGCACG CCGCTGGCCG ACGGCGCTTC GCTGGGCCTG
CACGAATCAC AATCCCGGCT CTGGGAAAAC CTGATCGGCC GGAGTCGGCC CTTCTGGGAG
TATTTCTATC CCCGGCTTCG GGAGTATTTT CCGGGCGTGC TCGACGACGT GCCGCTGGAT
GCCTTCTACC GGGCCATCAA CCGCGTGCAG CCCTCGCTCA TCCGCGTCGA GGCCGACGAG
GTCACCTACA ACCTGCACAT CCTGCTTCGC TTCGAACTGG AAGTCGCCCT GATCGAGGGG
AATCTTTCGG TGCAGGATCT TCCGGCCGCC TGGGACGAGG GCATGCAACG CTATCTCGGG
CTACGGCCGG AGACGCTTCG CGAAGGGGTG TTGCAGGATA TTCACTGGTC GCAGGGAGCT
TTCGGGTACT TTCCGACCTA TACTTTAGGG AACCTGATGT CGGCCCAGCT CTGGCGGGCC
ATCGAGCAGA CCGTCCCGGA CGTAGCAGCC TTCATGCAAC AGGGAGATTT TCGCCCGATT
CTTACCTGGT TGCGCACGCA AATCCACCGG CACGGCCGCG CCTGGAAGGC GCCGGTCCTG
CTTGAGCAGG CCACGGGCCA TCCGCTCGAT GCGGAACCCT GGCTGACGTA TATACGCAAA
AAGTACCAGG CGCTGTATCC CGCAGCGTCC GTATCTTTGT CGTAG
 
Protein sequence
MDKTSPFAIH PALAELCAHL ARMMDLRAAA ALLEWDQETY MPAGATAVRA EQLGTLHRLA 
HEWFIAERTG ELLEAAAASV RELPPEHLAV RLVEVVREDY DKARRVPPEL VAALARTESE
AREAWKQARQ ENHYAVFAPY LERLLALNRE KAEALGYEKH PYDALLDQYE PGMTTEAVRV
LFEQLRAELV PLVRALADQP QPEAAFLHRY VEPERQWALN RMVLEAIGFD LQRGRLDASV
HPFSTGIAIA DVRLTTRIDP HDFASGLFAT LHEAGHGLYE QGIDPVLERT PLADGASLGL
HESQSRLWEN LIGRSRPFWE YFYPRLREYF PGVLDDVPLD AFYRAINRVQ PSLIRVEADE
VTYNLHILLR FELEVALIEG NLSVQDLPAA WDEGMQRYLG LRPETLREGV LQDIHWSQGA
FGYFPTYTLG NLMSAQLWRA IEQTVPDVAA FMQQGDFRPI LTWLRTQIHR HGRAWKAPVL
LEQATGHPLD AEPWLTYIRK KYQALYPAAS VSLS