Gene Rmar_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1375 
Symbol 
ID8568025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1607644 
End bp1609509 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content65% 
IMG OID 
Productcopper-resistance protein, CopA family 
Protein accessionYP_003290652 
Protein GI268316933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.431573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGCT TCACACGTCG TGATTTTCTG CAGGCCCTGG CGTTGCTGGG CATTTCGACG 
GGGATCGAGG CGCTTCTGCC GGCCTATGCG CGCTCGCGTC CGCGCGTGCC CGCTCCCCGT
CGGCCACGCC GAGGCCCGGT AACCTACGAC CTGACCATTG CCGAAACGCC GATCCGCATC
GGCGGCCGCA GGGCAAAGGC CACCACCATC AACGGCACGG TGCCGGGGCC GCTGCTGCGC
TTCCGCGAAG GCGACGAGGT GATCATCCGC GTCACCAACC GCCTGAAAGA AGACACCTCC
ATCCACTGGC ATGGCGTGCT GGTGCCCTTC GACATGGACG GCGTGCCGGG CGTGAGCTTT
CCGGGCATCA AACCCGGTGA AACCTTCACG TACCGGTTCC GGCTGCGCCA GCACGGCACC
TACTGGTACC ACAGCCACAG CGGGCTGCAG GAACAGACGG GCATCTACGG CCCGCTCATC
ATCGACCCGG CCGAAGAGCC CTATCCCTAC GATCGCGAAT ACGTGATCGT GCTGAGCGAC
TGGACCTTTG AAAACCCATA CCGCGTGCTG GCCCGGCTGC GCAAGTACCC CGGCTACTAC
AACTTTCAGC GGCGCACGCT GGCCAATCTG TTCGAGGAAG CCCGTGAGAT GGGCTTCTGG
AAGGCGCTGA AGGATCGGCT GAGCTGGGGC CGCATGCGTA TGGGTGCCAC GGACATCGTG
GACATCACCG GCGCCACCTA CACGTACCTG ATGAACGGCC ACGCACCCGA AGACAACTGG
ACGGCCCTGT TCCGGCCGGG CGAGCGCGTG CGGCTGCGGT TCATCAACGC GGCGGCCGGC
AGCATCTTCG ATGTACGCAT CCCCGGTCTG CCGATGACGG TGATTCAGGC CGACGGTCAG
TACGTGCAGG CGGTTACGGT CGATGAGTTT CGCATCGGCA TTGCAGAAAC GTACGATGTA
ATTGTCGAGC CGAAAGAAGA GCAGGCCTAC ACGATCTTTG CCGAGTCGAT GGATCGCAGT
GGCTATGCCC GCGGTACGCT GGCGCCGCGC GAGGGCATGG AAGGTCCCAT CCCGCCGCTC
CGGAAGCGCC CGCTGCGCAC GCACGCCGAC ATGGGCATGG TGCACGAAGG ACACGAAGGC
CATGCGGGCA TGCCTCACGA GGCCATGGCC GCGCCCACCG AACACCGGGG GCACCAGATG
CCCGCCGACA CGACCGGACA TCACATGCAC GGCGGACATG ACCACCATGG CGGACATGCC
ATGATGGCGG GCATGATGGG CGGCGTGGGG CAGCCGCCGG GTATGCCACC GGAAGCGCAG
CCTCACGGCG ACGACACGCA CGGCCCGGGC AACGCGGCCG TACCGATGAT CACGCGCAGC
CGCCTGCACG AGCCGGGAGT AGGCCTGGGC GAAGACGGCT GGCGTGTGCT GGTCTATACC
GACCTCAAGA GCCTGCACCC CCGCGAGGAC TTCCGTCCAC CCACCCGTGA GATCGAGCTG
CACCTGACCG GCAACATGGA GCGCTTCCTC TGGGGCATCG ACGGCAAAAC CTATTCGGAA
GCGCCCGAGC CGATTCGTCT GCGCTACGGC GAGCGGGTGC GGCTCGTGCT CGTCAACGAC
ACGATGATGG AGCACCCCAT GCACCTGCAC GGGATGTGGA TGGAACTCGA AAACGGCCAT
GGCCGGCACA TTCCACGCAA ACACACGATC CTGGTCAAGC CGGCCGAGCG GCTTTCCGTG
CTGATCACGC CGGACGAACC CGGTCCGTGG GTGTTCCACT GCCACATCCT CTATCACATG
GAGATGGGGA TGTTTCGCGT CTTTGAAGTA TCCGAACCGG AAACGGCAAC CCGAACGTCA
TCATGA
 
Protein sequence
MKSFTRRDFL QALALLGIST GIEALLPAYA RSRPRVPAPR RPRRGPVTYD LTIAETPIRI 
GGRRAKATTI NGTVPGPLLR FREGDEVIIR VTNRLKEDTS IHWHGVLVPF DMDGVPGVSF
PGIKPGETFT YRFRLRQHGT YWYHSHSGLQ EQTGIYGPLI IDPAEEPYPY DREYVIVLSD
WTFENPYRVL ARLRKYPGYY NFQRRTLANL FEEAREMGFW KALKDRLSWG RMRMGATDIV
DITGATYTYL MNGHAPEDNW TALFRPGERV RLRFINAAAG SIFDVRIPGL PMTVIQADGQ
YVQAVTVDEF RIGIAETYDV IVEPKEEQAY TIFAESMDRS GYARGTLAPR EGMEGPIPPL
RKRPLRTHAD MGMVHEGHEG HAGMPHEAMA APTEHRGHQM PADTTGHHMH GGHDHHGGHA
MMAGMMGGVG QPPGMPPEAQ PHGDDTHGPG NAAVPMITRS RLHEPGVGLG EDGWRVLVYT
DLKSLHPRED FRPPTREIEL HLTGNMERFL WGIDGKTYSE APEPIRLRYG ERVRLVLVND
TMMEHPMHLH GMWMELENGH GRHIPRKHTI LVKPAERLSV LITPDEPGPW VFHCHILYHM
EMGMFRVFEV SEPETATRTS S