Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1375 |
Symbol | |
ID | 8568025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1607644 |
End bp | 1609509 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | copper-resistance protein, CopA family |
Protein accession | YP_003290652 |
Protein GI | 268316933 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.431573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGCT TCACACGTCG TGATTTTCTG CAGGCCCTGG CGTTGCTGGG CATTTCGACG GGGATCGAGG CGCTTCTGCC GGCCTATGCG CGCTCGCGTC CGCGCGTGCC CGCTCCCCGT CGGCCACGCC GAGGCCCGGT AACCTACGAC CTGACCATTG CCGAAACGCC GATCCGCATC GGCGGCCGCA GGGCAAAGGC CACCACCATC AACGGCACGG TGCCGGGGCC GCTGCTGCGC TTCCGCGAAG GCGACGAGGT GATCATCCGC GTCACCAACC GCCTGAAAGA AGACACCTCC ATCCACTGGC ATGGCGTGCT GGTGCCCTTC GACATGGACG GCGTGCCGGG CGTGAGCTTT CCGGGCATCA AACCCGGTGA AACCTTCACG TACCGGTTCC GGCTGCGCCA GCACGGCACC TACTGGTACC ACAGCCACAG CGGGCTGCAG GAACAGACGG GCATCTACGG CCCGCTCATC ATCGACCCGG CCGAAGAGCC CTATCCCTAC GATCGCGAAT ACGTGATCGT GCTGAGCGAC TGGACCTTTG AAAACCCATA CCGCGTGCTG GCCCGGCTGC GCAAGTACCC CGGCTACTAC AACTTTCAGC GGCGCACGCT GGCCAATCTG TTCGAGGAAG CCCGTGAGAT GGGCTTCTGG AAGGCGCTGA AGGATCGGCT GAGCTGGGGC CGCATGCGTA TGGGTGCCAC GGACATCGTG GACATCACCG GCGCCACCTA CACGTACCTG ATGAACGGCC ACGCACCCGA AGACAACTGG ACGGCCCTGT TCCGGCCGGG CGAGCGCGTG CGGCTGCGGT TCATCAACGC GGCGGCCGGC AGCATCTTCG ATGTACGCAT CCCCGGTCTG CCGATGACGG TGATTCAGGC CGACGGTCAG TACGTGCAGG CGGTTACGGT CGATGAGTTT CGCATCGGCA TTGCAGAAAC GTACGATGTA ATTGTCGAGC CGAAAGAAGA GCAGGCCTAC ACGATCTTTG CCGAGTCGAT GGATCGCAGT GGCTATGCCC GCGGTACGCT GGCGCCGCGC GAGGGCATGG AAGGTCCCAT CCCGCCGCTC CGGAAGCGCC CGCTGCGCAC GCACGCCGAC ATGGGCATGG TGCACGAAGG ACACGAAGGC CATGCGGGCA TGCCTCACGA GGCCATGGCC GCGCCCACCG AACACCGGGG GCACCAGATG CCCGCCGACA CGACCGGACA TCACATGCAC GGCGGACATG ACCACCATGG CGGACATGCC ATGATGGCGG GCATGATGGG CGGCGTGGGG CAGCCGCCGG GTATGCCACC GGAAGCGCAG CCTCACGGCG ACGACACGCA CGGCCCGGGC AACGCGGCCG TACCGATGAT CACGCGCAGC CGCCTGCACG AGCCGGGAGT AGGCCTGGGC GAAGACGGCT GGCGTGTGCT GGTCTATACC GACCTCAAGA GCCTGCACCC CCGCGAGGAC TTCCGTCCAC CCACCCGTGA GATCGAGCTG CACCTGACCG GCAACATGGA GCGCTTCCTC TGGGGCATCG ACGGCAAAAC CTATTCGGAA GCGCCCGAGC CGATTCGTCT GCGCTACGGC GAGCGGGTGC GGCTCGTGCT CGTCAACGAC ACGATGATGG AGCACCCCAT GCACCTGCAC GGGATGTGGA TGGAACTCGA AAACGGCCAT GGCCGGCACA TTCCACGCAA ACACACGATC CTGGTCAAGC CGGCCGAGCG GCTTTCCGTG CTGATCACGC CGGACGAACC CGGTCCGTGG GTGTTCCACT GCCACATCCT CTATCACATG GAGATGGGGA TGTTTCGCGT CTTTGAAGTA TCCGAACCGG AAACGGCAAC CCGAACGTCA TCATGA
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Protein sequence | MKSFTRRDFL QALALLGIST GIEALLPAYA RSRPRVPAPR RPRRGPVTYD LTIAETPIRI GGRRAKATTI NGTVPGPLLR FREGDEVIIR VTNRLKEDTS IHWHGVLVPF DMDGVPGVSF PGIKPGETFT YRFRLRQHGT YWYHSHSGLQ EQTGIYGPLI IDPAEEPYPY DREYVIVLSD WTFENPYRVL ARLRKYPGYY NFQRRTLANL FEEAREMGFW KALKDRLSWG RMRMGATDIV DITGATYTYL MNGHAPEDNW TALFRPGERV RLRFINAAAG SIFDVRIPGL PMTVIQADGQ YVQAVTVDEF RIGIAETYDV IVEPKEEQAY TIFAESMDRS GYARGTLAPR EGMEGPIPPL RKRPLRTHAD MGMVHEGHEG HAGMPHEAMA APTEHRGHQM PADTTGHHMH GGHDHHGGHA MMAGMMGGVG QPPGMPPEAQ PHGDDTHGPG NAAVPMITRS RLHEPGVGLG EDGWRVLVYT DLKSLHPRED FRPPTREIEL HLTGNMERFL WGIDGKTYSE APEPIRLRYG ERVRLVLVND TMMEHPMHLH GMWMELENGH GRHIPRKHTI LVKPAERLSV LITPDEPGPW VFHCHILYHM EMGMFRVFEV SEPETATRTS S
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