Gene Rmar_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1358 
Symbol 
ID8568008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1591222 
End bp1592826 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content64% 
IMG OID 
ProductN-acyl-D-amino-acid deacylase 
Protein accessionYP_003290635 
Protein GI268316916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGCCC TGCTACTGGC GCTGTGCATC GGGCTGATTA CCGAGCCTTT ACCGACACAG 
TCTGACACAA TCTACACGGT CATTCTGGAA GGCGGCACCA TTTACGATGG CACCGGCAAG
GCCCCGTTTG TTGCCGACGT AGGACTGATC GGCGACCGCA TTGCCGCCAT CGGGGATCTG
AAGGAAGCGC GTGCGGCGCT CCGGCTGAAC GTCGACGGGC TGGCCGTGGC CCCCGGTTTT
ATCGACATCC ACAGCCATGC CGTACGGGGC GGCCCGGAAA CCAGCGGCAT CTTTCGCCAG
CCGCTGGCCG AAAACTACAT CCGCCAGGGT GTCACCACGG TGTTTGCCGG GCAGGACGGC
TCCTCACCGC TGCCCATCGG GGAGTTTCTG GCACGGTTCG AGTTGACGCC GGCCGCCATC
AATCTGGGGC TGTTCGTGGG ACACGGAAGC GTCCGTCGCG CCGTCATGGG CAATGAAAAC
CGCGATCCCA CTCCAGAGGA GCTGGAGCAG ATGAAAGCCC TGGTGGCGCA GGCCATGGAA
GAAGGCGCCT GGGGCCTGTC GTCGGGACTG AAGTACGTCC CCGGTGCCTA TGCACGCACC
GAAGAGGTCA TCGAACTGGC CCGCGTGGCC GCCCGCTACG GCGGCATCTA CATCACACAC
ATGCGAGATG AAGGACTGCA CGTGCTGGAG AGCGTCAAGG AGACCATTCG GATCGGCCGC
GAAGGCGGCC TGCCAGCGCA GATCACCCAT GCCAAAATCA TCGGCCCGCG CATGTGGGGC
AAAAGCCGGG AAATGCTGCG CCTGGTGGAC GAAGCCCTGC AGGCCGGCGT CGATGTCTCT
ATGGATCAGT ATCCCTACAC GGCCTCCAGC ACGGGCATCA GCGTGCTGTT TCCGGCCTGG
GCGCTGGAAG GGAGTCGTGA GGACATCGTT GCCCGGCTGC AGGACCCTGA GGCCCGTGCC
CGCATCAAAG AAGCGGTTAT TTTCAACCTG CGCGAAGATC GAGGTGGTGG TGATCCTTCG
CGGGTCCAGC TGGCCTTCTG CCGCTGGGAT ACGACACTGA ATGGGAAAAA CCTGGCGCAG
GTGCTCCGGG AGCAGGGTCG CCCGGTTACC GTCGAGGAAG CGGCCGAACT GGTGCTCGAA
ATTCAGGAGC AAGGCGGCTG CACAGGCATC TTCCACGCCA TGAGCGAAGA AGACGTCGAG
CGAATCATGC AGCATCCCCG CACGATGATC TGCTCCGACG GCGGCATTCC AGATCCCGGC
GTCGGTGTTC CCCACCCGCG TAACTACGGC GCCTTTGCGC GCGTGCTGGC CCGCTACGTC
CGCGAGCGCA GAATTCTGAC GCCCGAAATG GCCATCCACA AAATGACCGG CCTGCCCGCC
TGGCGCCTCA ACCTGAAGGA CCGTGGCGTG CTACGCCCCG GCGCCTATGC GGATGTGGTG
GTGCTGGACC TGAACCGCGT CCAGGACCGC GCCACGTTTA CCGATCCCCA CCGGTACGCC
GAGGGCGTTG TGCACGTGTT CGTCAACGGC CAGGCCGTGT TGCTTGACGG CAAACTCACC
GGCGCACGCC CCGGCCGTGC CCTGCGCAAA GGACGTGACG GGTAA
 
Protein sequence
MLALLLALCI GLITEPLPTQ SDTIYTVILE GGTIYDGTGK APFVADVGLI GDRIAAIGDL 
KEARAALRLN VDGLAVAPGF IDIHSHAVRG GPETSGIFRQ PLAENYIRQG VTTVFAGQDG
SSPLPIGEFL ARFELTPAAI NLGLFVGHGS VRRAVMGNEN RDPTPEELEQ MKALVAQAME
EGAWGLSSGL KYVPGAYART EEVIELARVA ARYGGIYITH MRDEGLHVLE SVKETIRIGR
EGGLPAQITH AKIIGPRMWG KSREMLRLVD EALQAGVDVS MDQYPYTASS TGISVLFPAW
ALEGSREDIV ARLQDPEARA RIKEAVIFNL REDRGGGDPS RVQLAFCRWD TTLNGKNLAQ
VLREQGRPVT VEEAAELVLE IQEQGGCTGI FHAMSEEDVE RIMQHPRTMI CSDGGIPDPG
VGVPHPRNYG AFARVLARYV RERRILTPEM AIHKMTGLPA WRLNLKDRGV LRPGAYADVV
VLDLNRVQDR ATFTDPHRYA EGVVHVFVNG QAVLLDGKLT GARPGRALRK GRDG