Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1356 |
Symbol | |
ID | 8568006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1588780 |
End bp | 1590000 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | exodeoxyribonuclease VII, large subunit |
Protein accession | YP_003290633 |
Protein GI | 268316914 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCTT TGTTTGATTC TATCTTCGAG CCACGCGTCT GGCGGGTCGG CGAACTGGCC AAGGCGCTCT GCGAGACGGT TGAATCGCTC TACGACGAGC TGATCGTCGA AGGCGAGCTC TCGAATTTTC GGCGGCACCG GCAGAGTGGC CACTGCTACT TTACGCTGCA GGATGGCGAG GCCCAGCTTC GCTGCGTCAT GTGGGCCAGC CGGGTGCAGC GACTGTACTT CCGGCCGGAA GACGGCCACC AGGTACAGGT CCATGGCCGT CTGACGTTCT ACAAGCCCCG AGGCGAGTTG CAGTTGATTG CCACGTCAAT GACGCTGGCC GGCGCCGGTG CCCGCCAGCA GGCCTTCGAG GCGCTCAAGC GCAGGCTGGA AGCCGAGGGA CTCTTCGACC CGGACCGGAA GCGTCCCCTT CCCCGCTTTC CCCGACGAAT CGGCGTCGTC ACCTCCGACA GCGGTGCCGC GTTGCAGGAT ATTCTCAGCA TTCTGCGTCG CCGCTTTCCC GTCGTCGAGG TGCTGCACTG CCCGGTGCAC GTGCAGGGAT TGCAGGCGGC GCCGTCGATT GCCCGGGCCA TCCGACTGAT GAACCGGCTA CCGGAGGATC GCCGTCCGGA CGTGCTCATT GTGGGACGCG GCGGCGGATC GGTGGAAGAC CTGTGGGCCT TCAACGAGGA AGTGGTCGCC CGGGCGATTT TCGCCTCCCA CATCCCTGTC ATCAGCGCCG TCGGACACGA AACGGACGTG TCGATTGCGG ATCTGGTGGC CGACCGACGG GCGGCCACGC CGTCGATGGC GGCCGAGATC GCCGTACCGG ATCGAGACGA ACTGGAAACC ATGCTGATCC GCACCGTGCA GGTCATGCGT CAGTACCTCC GGCAGGGTCT CGATCGGCGG CGCCAGCGTG TGCACATGCT GTTGCACCAC TACGGCCTGC GTCGCGTCCC GGACCGGCTG GACCTCCTGA AGACCGAACT GCAACGGCTG GAAGCGGCTC TGCAGCAACA GGTCCGGCAA TTGCTGGAAC GGCGTCGGCA GACGTTGACC CTGCTGCAGA GCCGCCTGAA TGCCTTCGAT CCGCAGCTTC CCCTGCAACG GGGCTACGTG CGCGTGCGGT GCAATGGTAG CCTCGCCACC CGTGCGCATC AGCTCCAACC CGGCGACGCG GTCACGCTCG AATTCTACGA TGGCCGGCGC GACGCCCGGA TCACCTCTTA A
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Protein sequence | MQPLFDSIFE PRVWRVGELA KALCETVESL YDELIVEGEL SNFRRHRQSG HCYFTLQDGE AQLRCVMWAS RVQRLYFRPE DGHQVQVHGR LTFYKPRGEL QLIATSMTLA GAGARQQAFE ALKRRLEAEG LFDPDRKRPL PRFPRRIGVV TSDSGAALQD ILSILRRRFP VVEVLHCPVH VQGLQAAPSI ARAIRLMNRL PEDRRPDVLI VGRGGGSVED LWAFNEEVVA RAIFASHIPV ISAVGHETDV SIADLVADRR AATPSMAAEI AVPDRDELET MLIRTVQVMR QYLRQGLDRR RQRVHMLLHH YGLRRVPDRL DLLKTELQRL EAALQQQVRQ LLERRRQTLT LLQSRLNAFD PQLPLQRGYV RVRCNGSLAT RAHQLQPGDA VTLEFYDGRR DARITS
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