Gene Rmar_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1356 
Symbol 
ID8568006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1588780 
End bp1590000 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content65% 
IMG OID 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_003290633 
Protein GI268316914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCTT TGTTTGATTC TATCTTCGAG CCACGCGTCT GGCGGGTCGG CGAACTGGCC 
AAGGCGCTCT GCGAGACGGT TGAATCGCTC TACGACGAGC TGATCGTCGA AGGCGAGCTC
TCGAATTTTC GGCGGCACCG GCAGAGTGGC CACTGCTACT TTACGCTGCA GGATGGCGAG
GCCCAGCTTC GCTGCGTCAT GTGGGCCAGC CGGGTGCAGC GACTGTACTT CCGGCCGGAA
GACGGCCACC AGGTACAGGT CCATGGCCGT CTGACGTTCT ACAAGCCCCG AGGCGAGTTG
CAGTTGATTG CCACGTCAAT GACGCTGGCC GGCGCCGGTG CCCGCCAGCA GGCCTTCGAG
GCGCTCAAGC GCAGGCTGGA AGCCGAGGGA CTCTTCGACC CGGACCGGAA GCGTCCCCTT
CCCCGCTTTC CCCGACGAAT CGGCGTCGTC ACCTCCGACA GCGGTGCCGC GTTGCAGGAT
ATTCTCAGCA TTCTGCGTCG CCGCTTTCCC GTCGTCGAGG TGCTGCACTG CCCGGTGCAC
GTGCAGGGAT TGCAGGCGGC GCCGTCGATT GCCCGGGCCA TCCGACTGAT GAACCGGCTA
CCGGAGGATC GCCGTCCGGA CGTGCTCATT GTGGGACGCG GCGGCGGATC GGTGGAAGAC
CTGTGGGCCT TCAACGAGGA AGTGGTCGCC CGGGCGATTT TCGCCTCCCA CATCCCTGTC
ATCAGCGCCG TCGGACACGA AACGGACGTG TCGATTGCGG ATCTGGTGGC CGACCGACGG
GCGGCCACGC CGTCGATGGC GGCCGAGATC GCCGTACCGG ATCGAGACGA ACTGGAAACC
ATGCTGATCC GCACCGTGCA GGTCATGCGT CAGTACCTCC GGCAGGGTCT CGATCGGCGG
CGCCAGCGTG TGCACATGCT GTTGCACCAC TACGGCCTGC GTCGCGTCCC GGACCGGCTG
GACCTCCTGA AGACCGAACT GCAACGGCTG GAAGCGGCTC TGCAGCAACA GGTCCGGCAA
TTGCTGGAAC GGCGTCGGCA GACGTTGACC CTGCTGCAGA GCCGCCTGAA TGCCTTCGAT
CCGCAGCTTC CCCTGCAACG GGGCTACGTG CGCGTGCGGT GCAATGGTAG CCTCGCCACC
CGTGCGCATC AGCTCCAACC CGGCGACGCG GTCACGCTCG AATTCTACGA TGGCCGGCGC
GACGCCCGGA TCACCTCTTA A
 
Protein sequence
MQPLFDSIFE PRVWRVGELA KALCETVESL YDELIVEGEL SNFRRHRQSG HCYFTLQDGE 
AQLRCVMWAS RVQRLYFRPE DGHQVQVHGR LTFYKPRGEL QLIATSMTLA GAGARQQAFE
ALKRRLEAEG LFDPDRKRPL PRFPRRIGVV TSDSGAALQD ILSILRRRFP VVEVLHCPVH
VQGLQAAPSI ARAIRLMNRL PEDRRPDVLI VGRGGGSVED LWAFNEEVVA RAIFASHIPV
ISAVGHETDV SIADLVADRR AATPSMAAEI AVPDRDELET MLIRTVQVMR QYLRQGLDRR
RQRVHMLLHH YGLRRVPDRL DLLKTELQRL EAALQQQVRQ LLERRRQTLT LLQSRLNAFD
PQLPLQRGYV RVRCNGSLAT RAHQLQPGDA VTLEFYDGRR DARITS