Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1345 |
Symbol | |
ID | 8567995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1576468 |
End bp | 1577601 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | glycoside hydrolase family 18 |
Protein accession | YP_003290622 |
Protein GI | 268316903 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTATCG GATGGATATG CCTGGTCGTG TGCTTGCTCT GGGGATGTGC CCGGGAGCAG CCGGCGCTGG ATTTTCGTGT GGTGGGCTAT CTGTACGGGC CGCGGATGGA CAGCCTGCCG GTGCTGGAGC TGTCCGGCCT GACCCACCTG AACTATGCCT TTGCAAACGT GCGCCCTGAC GGTCGGGTTG TGCTGGAGAC GTCGGACGAC AGCGTGCGGT TGCGCCGACT GGTGGGAATG CGGGGCATGG AAGGCCCTCG GATCTTGCTC TCGGTGGGAG GGTGGACCTG GTCGGATTAT TTCTCGGATG CGGCGCTGAC CGAGGCGTCC CGCCAGCGCT TTGCAGAGAG TGCGGGCTCT TTGCTGGTGG CCTTCGATCT GGACGGGCTG GATATCGACT GGGAGTATCC GGGACAGCCG GGCGAGGGTA ACGTGTATCG AGAGGAGGAT CGGGAGCATT TCACGTGGCT GCTGGCATCG GTGCGGGCGG TGCTGGATTC GCTGGAGCAG GCGCACGGTC GAACCTACCT GCTGACCATT GCGGCGGCGG CCGGACCGGA ATACCTGAAG CATGTGGAAA TCGCGCAGGT GCAGGCTCTG GTGGATTTTA TCAACCTGAT GACGTATGAT TTCCATGGAA GCTGGACGCC GCACACGGGG CACCATGCGA ACCTGTATCC GTCGTCGCTG GACCCGGAAG GGATTTCGGT AGATGGGGCT GTTCGGCGCT ACCTGGCGGC TGGAGTGCCG GGGGAGAAGC TGGTGGTCGG CGTGCCGTTT TACGGCCGTG GATGGCGCGG GGTGCGGCCG GAGCATAACG GGCGGTATCA GCCCTACGAG GCGTCGCTTA CGGAGGAGCT GTCGTTTGCC ACATTGCAGC GTGACTACAT CGGACGGGCC GGTTTTGTGC GCTACTGGGA TGAAGAAGCG CGGGCGCCAT ATCTGTGGCA TGCCGCGGAG CGGATCTTTA TCTCCTACGA GGATACGCAG TCGCTGGCCG AGAAGGTGGC CTACGTGCGG GCGCATCGGC TGGGGGGTCT GATGTTCTGG GAATACAGCG GGGATGCGGG CGGGGTGCTG CGGTGCCTTG CAGCCTCGAT AAATCCGTTA TTGCAATGCA GAGAAGAGAG CTGA
|
Protein sequence | MRIGWICLVV CLLWGCAREQ PALDFRVVGY LYGPRMDSLP VLELSGLTHL NYAFANVRPD GRVVLETSDD SVRLRRLVGM RGMEGPRILL SVGGWTWSDY FSDAALTEAS RQRFAESAGS LLVAFDLDGL DIDWEYPGQP GEGNVYREED REHFTWLLAS VRAVLDSLEQ AHGRTYLLTI AAAAGPEYLK HVEIAQVQAL VDFINLMTYD FHGSWTPHTG HHANLYPSSL DPEGISVDGA VRRYLAAGVP GEKLVVGVPF YGRGWRGVRP EHNGRYQPYE ASLTEELSFA TLQRDYIGRA GFVRYWDEEA RAPYLWHAAE RIFISYEDTQ SLAEKVAYVR AHRLGGLMFW EYSGDAGGVL RCLAASINPL LQCREES
|
| |