| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1335 |
|---|
| Symbol | |
|---|
| ID | 8567985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1563515 |
|---|
| End bp | 1564321 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase |
|---|
| Protein accession | YP_003290612 |
|---|
| Protein GI | 268316893 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.381223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTTG CTTACGTGCA GTACAATCCG GCCTATCTTC AAATCACGCA GAACCTGAAG
CAGGTTGAAG CACTGCTTGA AGGCATAGAG GCCGACCTGA TCGTGCTGCC GGAACTGTTC
GCCAGCGGTT ATTTCTTCAG ATCACACGAA GATCTGGTAG CCGTTGCCGA GCCTATCCCG
GAGGGACCTA CCACGCAGTG GATGATCGAG TGGTGCCGGA AGACGGGCAC CGTCATGGTC
GGCGGCCTGC CCGAGCGCGA CGGCGATCGA TTTTACAACA GCGCGGTCGC GGTGGGGCCC
GAAGGCCTGA TCGGCCGCTA TCGCAAAGTG CATCTCTTCT ACGAAGAAAA GCTGCATTTC
AGCCCGGGCA ACCTGGGGTT TCAGGTGTTC GAGGTGGCCG ATCGGAATGG CCAGCTCTAC
CGGCTGGGTG TCATGATCTG TTTCGACTGG TATTTTCCGG AGGCGGCCCG CACGCTGGCG
CTTCAGGGCG CCGACGTGAT CGCGCATCCG TCCAATCTGG TACGTCCGGA CTGCCCTCGC
GCCATGCCCA TCCGGGCGCT GGAAAACCAT GTGTTTACGA TCACGGCCAA CCGCTACGGC
GTTGAGTCCA ACGGTCGGGA GACGCTTCGC TTCATCGGGC GCAGCCTGAT CTGTGATCCG
GCCGGTCGAG TGCTTCAGGA GGCCCCGCCT GAAGGGGATC AGGTAGGCAT CGCCGAAATC
ACACCTCGGG AGGCGCGCAA CCGGCGCATT ACGCCCCATA ACGACCTGTT CGAAGATCGA
CGGCCGGACT GCTACCGGCT GAGCTGA
|
|---|
| Protein sequence | MQVAYVQYNP AYLQITQNLK QVEALLEGIE ADLIVLPELF ASGYFFRSHE DLVAVAEPIP
EGPTTQWMIE WCRKTGTVMV GGLPERDGDR FYNSAVAVGP EGLIGRYRKV HLFYEEKLHF
SPGNLGFQVF EVADRNGQLY RLGVMICFDW YFPEAARTLA LQGADVIAHP SNLVRPDCPR
AMPIRALENH VFTITANRYG VESNGRETLR FIGRSLICDP AGRVLQEAPP EGDQVGIAEI
TPREARNRRI TPHNDLFEDR RPDCYRLS
|
|---|
| |