| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1333 |
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| Symbol | |
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| ID | 8567983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1561496 |
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| End bp | 1562539 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003290610 |
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| Protein GI | 268316891 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00834702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGC GCATTCGTCC CAAAAAGAAA GATAAGGTCA CCATCTACGA CGTCGCCCGG
GAAGCCGGTG TTGCCATCTC GACGGTCTCC CGCGTGTTGA ACAACTCCAG CGACGTCTCG
GAAGAAACGC GGCAACGCGT TCTTCGGGCC ATCGAGAAGC TTCAGTTTCG CCCGGATCGA
ACCGCCCGCA CGCTGGCTCA GAAGAAAACG CGCGTGCTGG CCGTGGCCGT CACGTCGTTC
ACGACGCCTT TCCACAACGA AATCCTCAAA GGCGTCCGCA CGGCCATGGA AAACGTGGAC
GCCGACCTGC TGTTGAGCGA CCTGGGTTCG AAGTATCCCC AGCAGAAGCT GCTCAACTTC
CTGCGGCGTG GCGCGGTCGA CGGTCTTCTC GTGATCGGGT TGCCCGCTGA CGAAAAGCTT
ACGCTGGAAC TCCGAGCCCT TCATGCACCC GTGGTCATGG TGGGCTACCA TCACACCGAC
TTCGACTGCT TCTACTGGGA CGACCGCGTA GGCGCCCGAA AGGCCGTCGA ACACCTGATC
GCCTGCGGTC ATCGTCGCAT TGGCATGATC CGTTCGCATA CGGAGGGTAG CCTGCAGCTC
GATCGCATTG CCGGCTACCG GGAGGCGCTG GAGGCGGCCG GGATTCCGTT CGATCCCGAG
CTGGTACGTG CCGGCAAAAC CGAAAAGCAT GCGGGCTTCA GCGAGGAGGC CGGCTACGAG
GCCATGCAGG ATCTCTTGAA AATTGAGCCC CGGGTGACGG CCGTCTTTGC CAGCAGCGAC
GTGCAGGCGA TCGGGGCCTG GAAGGCGCTG CGCGAGGCCG GCCTGCGCGT GCCCGAGGAC
GTGGCACTTG TGGGCTACGA CGATATTAAA ATCAGCGAGT ACATCGGCCT CTCCAGCGTC
TCCCAGAACA TGCATGCGGT GGGCCGCGAG GCGACGCGCC TGCTGGTGGA ACGCGTCGAA
GGGAAGCGGC AGGATCCGCC GCTGGAAGTG CTGGTAGTGC CACAGCTCAA GATCCGTTAC
TCGAGCGACT GCGGACGTGC CTGA
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| Protein sequence | MAQRIRPKKK DKVTIYDVAR EAGVAISTVS RVLNNSSDVS EETRQRVLRA IEKLQFRPDR
TARTLAQKKT RVLAVAVTSF TTPFHNEILK GVRTAMENVD ADLLLSDLGS KYPQQKLLNF
LRRGAVDGLL VIGLPADEKL TLELRALHAP VVMVGYHHTD FDCFYWDDRV GARKAVEHLI
ACGHRRIGMI RSHTEGSLQL DRIAGYREAL EAAGIPFDPE LVRAGKTEKH AGFSEEAGYE
AMQDLLKIEP RVTAVFASSD VQAIGAWKAL REAGLRVPED VALVGYDDIK ISEYIGLSSV
SQNMHAVGRE ATRLLVERVE GKRQDPPLEV LVVPQLKIRY SSDCGRA
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