Gene Rmar_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1333 
Symbol 
ID8567983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1561496 
End bp1562539 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content63% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003290610 
Protein GI268316891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00834702 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGC GCATTCGTCC CAAAAAGAAA GATAAGGTCA CCATCTACGA CGTCGCCCGG 
GAAGCCGGTG TTGCCATCTC GACGGTCTCC CGCGTGTTGA ACAACTCCAG CGACGTCTCG
GAAGAAACGC GGCAACGCGT TCTTCGGGCC ATCGAGAAGC TTCAGTTTCG CCCGGATCGA
ACCGCCCGCA CGCTGGCTCA GAAGAAAACG CGCGTGCTGG CCGTGGCCGT CACGTCGTTC
ACGACGCCTT TCCACAACGA AATCCTCAAA GGCGTCCGCA CGGCCATGGA AAACGTGGAC
GCCGACCTGC TGTTGAGCGA CCTGGGTTCG AAGTATCCCC AGCAGAAGCT GCTCAACTTC
CTGCGGCGTG GCGCGGTCGA CGGTCTTCTC GTGATCGGGT TGCCCGCTGA CGAAAAGCTT
ACGCTGGAAC TCCGAGCCCT TCATGCACCC GTGGTCATGG TGGGCTACCA TCACACCGAC
TTCGACTGCT TCTACTGGGA CGACCGCGTA GGCGCCCGAA AGGCCGTCGA ACACCTGATC
GCCTGCGGTC ATCGTCGCAT TGGCATGATC CGTTCGCATA CGGAGGGTAG CCTGCAGCTC
GATCGCATTG CCGGCTACCG GGAGGCGCTG GAGGCGGCCG GGATTCCGTT CGATCCCGAG
CTGGTACGTG CCGGCAAAAC CGAAAAGCAT GCGGGCTTCA GCGAGGAGGC CGGCTACGAG
GCCATGCAGG ATCTCTTGAA AATTGAGCCC CGGGTGACGG CCGTCTTTGC CAGCAGCGAC
GTGCAGGCGA TCGGGGCCTG GAAGGCGCTG CGCGAGGCCG GCCTGCGCGT GCCCGAGGAC
GTGGCACTTG TGGGCTACGA CGATATTAAA ATCAGCGAGT ACATCGGCCT CTCCAGCGTC
TCCCAGAACA TGCATGCGGT GGGCCGCGAG GCGACGCGCC TGCTGGTGGA ACGCGTCGAA
GGGAAGCGGC AGGATCCGCC GCTGGAAGTG CTGGTAGTGC CACAGCTCAA GATCCGTTAC
TCGAGCGACT GCGGACGTGC CTGA
 
Protein sequence
MAQRIRPKKK DKVTIYDVAR EAGVAISTVS RVLNNSSDVS EETRQRVLRA IEKLQFRPDR 
TARTLAQKKT RVLAVAVTSF TTPFHNEILK GVRTAMENVD ADLLLSDLGS KYPQQKLLNF
LRRGAVDGLL VIGLPADEKL TLELRALHAP VVMVGYHHTD FDCFYWDDRV GARKAVEHLI
ACGHRRIGMI RSHTEGSLQL DRIAGYREAL EAAGIPFDPE LVRAGKTEKH AGFSEEAGYE
AMQDLLKIEP RVTAVFASSD VQAIGAWKAL REAGLRVPED VALVGYDDIK ISEYIGLSSV
SQNMHAVGRE ATRLLVERVE GKRQDPPLEV LVVPQLKIRY SSDCGRA