Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1333 |
Symbol | |
ID | 8567983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1561496 |
End bp | 1562539 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003290610 |
Protein GI | 268316891 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00834702 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAGC GCATTCGTCC CAAAAAGAAA GATAAGGTCA CCATCTACGA CGTCGCCCGG GAAGCCGGTG TTGCCATCTC GACGGTCTCC CGCGTGTTGA ACAACTCCAG CGACGTCTCG GAAGAAACGC GGCAACGCGT TCTTCGGGCC ATCGAGAAGC TTCAGTTTCG CCCGGATCGA ACCGCCCGCA CGCTGGCTCA GAAGAAAACG CGCGTGCTGG CCGTGGCCGT CACGTCGTTC ACGACGCCTT TCCACAACGA AATCCTCAAA GGCGTCCGCA CGGCCATGGA AAACGTGGAC GCCGACCTGC TGTTGAGCGA CCTGGGTTCG AAGTATCCCC AGCAGAAGCT GCTCAACTTC CTGCGGCGTG GCGCGGTCGA CGGTCTTCTC GTGATCGGGT TGCCCGCTGA CGAAAAGCTT ACGCTGGAAC TCCGAGCCCT TCATGCACCC GTGGTCATGG TGGGCTACCA TCACACCGAC TTCGACTGCT TCTACTGGGA CGACCGCGTA GGCGCCCGAA AGGCCGTCGA ACACCTGATC GCCTGCGGTC ATCGTCGCAT TGGCATGATC CGTTCGCATA CGGAGGGTAG CCTGCAGCTC GATCGCATTG CCGGCTACCG GGAGGCGCTG GAGGCGGCCG GGATTCCGTT CGATCCCGAG CTGGTACGTG CCGGCAAAAC CGAAAAGCAT GCGGGCTTCA GCGAGGAGGC CGGCTACGAG GCCATGCAGG ATCTCTTGAA AATTGAGCCC CGGGTGACGG CCGTCTTTGC CAGCAGCGAC GTGCAGGCGA TCGGGGCCTG GAAGGCGCTG CGCGAGGCCG GCCTGCGCGT GCCCGAGGAC GTGGCACTTG TGGGCTACGA CGATATTAAA ATCAGCGAGT ACATCGGCCT CTCCAGCGTC TCCCAGAACA TGCATGCGGT GGGCCGCGAG GCGACGCGCC TGCTGGTGGA ACGCGTCGAA GGGAAGCGGC AGGATCCGCC GCTGGAAGTG CTGGTAGTGC CACAGCTCAA GATCCGTTAC TCGAGCGACT GCGGACGTGC CTGA
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Protein sequence | MAQRIRPKKK DKVTIYDVAR EAGVAISTVS RVLNNSSDVS EETRQRVLRA IEKLQFRPDR TARTLAQKKT RVLAVAVTSF TTPFHNEILK GVRTAMENVD ADLLLSDLGS KYPQQKLLNF LRRGAVDGLL VIGLPADEKL TLELRALHAP VVMVGYHHTD FDCFYWDDRV GARKAVEHLI ACGHRRIGMI RSHTEGSLQL DRIAGYREAL EAAGIPFDPE LVRAGKTEKH AGFSEEAGYE AMQDLLKIEP RVTAVFASSD VQAIGAWKAL REAGLRVPED VALVGYDDIK ISEYIGLSSV SQNMHAVGRE ATRLLVERVE GKRQDPPLEV LVVPQLKIRY SSDCGRA
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