Gene Rmar_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1314 
Symbol 
ID8567964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1540493 
End bp1542811 
Gene Length2319 bp 
Protein Length772 aa 
Translation table11 
GC content67% 
IMG OID 
ProductPolyribonucleotide nucleotidyltransferase 
Protein accessionYP_003290592 
Protein GI268316873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.122367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACGC AGACAACCAT TCACGAAATC GAATTCGCCC CGGGGAAGTC ACTGCGCCTG 
GAGACGGGGC GTCTGGCCAA GCAGGCCAAC GGCGCTGTGG TCGTCCGCCA GGGCGACACG
ATGGTGCTCT GCACGGCCGT GCTGGCCGAC GAACCCCGCG AGGGGCAGAG CTTTTTCCCG
CTGACGGTCG AGTACCGCGA GAAATTTGCC GCCGGTGGCC GAATCCCGGG CGGCTTCATC
AAGCGTGAGG GACGTCCGAC GGATAAAGAA ATCCTCTCCT CGCGCCTGAT CGACCGGGCC
ATCCGGCCGC TTTTTCCGGA TGGCTTCTTC CACGAAGTGC AGATCATCTG CTACGTGATC
TCGGCCGACG ATCGGTACGA CGCCGACGTG CTGGCCGGTA CGGGCGCTTC GGCCGCGCTG
CTGCTGGCTG GCGCGCCCTT CGACGGACCG ATCGCCGAGG TGCGTGTGGG ACGCGTCGAC
GGCCAGTTCG TGGTCAACCC CACGCTCAAG GAGCTCGAGC AGAGCGACAT CAACCTGGTG
GTGGCCGGCA AGGAGGACGC CATCGTGATG GTCGAGGGCG AGATGAAGGA AGTCAGCGAG
GAGGACATGC TTGAGGCCCT CGAGGTGGCG CATGAGGCCA TCCGCAAGCT CTGCCGGGGC
CAGCTCGAAT TTGTGGCGGC GCACGGTCGT CCGGAACCCT TCCCGTACCA GACGACCACG
CTTCCGGAGG AGCTGGTGGC GCGCGTGCGC GAACTGGCCG TGCCCAAGCT GGAAGCGCAC
CTGCGTGCAC CCTACGACAA GCAGACCTTC TACGAAGGAC TGGAGCAGAT CGGTGAGGAG
ACGGTCGCGG CCCTGCTGGG CACGACCGAC GCGGAAGGCA ACCAGGTGCT GGCCGAGGCC
ACGCCCGAAG GGTGGACGGC CGACCAGATC CGCAAGGCGG TCTCGCAGGT GACCCGCGAG
GTCATGCGCC AGATGATCCT GCGGGAAGGT CGCCGGATCG ACGGCCGCAG CCTGGACGAG
ATCCGGCCGA TCTGGATGGA AGTGGGCTAT CTGCCCCGCG TGCACGGCTC GGCCATCTTC
ACCCGCGGCG AAACGCAGGT GCTGGCCTCC GTGACGCTGG GCACGTCGAA AGACGTGCAG
ATGATCGACC AGATCTTCGT CCAGGGCGAC AAGCGGTTCT TCCTGCACTA CGAGTTTCCG
CCCTTCTGCA CGGGCGAGAT TCGCTTCCTG CGTGGACCGG GACGGCGCGA GATCGGCCAC
GGCTATCTGG CCGAGCGGGC GCTGGCCGCC ATGCTGCCGG ACGAATCGTC GTTCCCCTAC
ACGATCCGCG TGAACGCCGA TGTGCTGGAG TCGAACGGCT CCTCGTCGAT GGCCAGCGTG
TGCGCCGGCT CGCTGGCGCT CATGGACGCC GGCGTGCCCG TCAAGAAGCA CGTGGCCGGC
GTGGCCATGG GCCTGATCAA AGAAGGCGAC CAGGTGGCCA TCCTGACCGA CATCCTCGGC
ACCGAAGACC ACCTGGGCGA CATGGACTTC AAGGTGGCCG GCACGCGCGA CGGCATCACG
GCCTGCCAGA TGGACATCAA AATCGGTGGG CTGACGCGGG AGATCATGCA GCGCGCGCTG
GAGCAGGCCC GTCGCGCCCG GATGTACATC CTGGATCTGA TGGAGCAGAC CATCGAAGCG
CCGCGTCCAG AGCTTTCGCC ATATGCGCCT CGCCTGACGC AGATCACGAT CGATCCGGAG
TTCATCGGCG CCGTGATCGG TCCGGGCGGC CGCGTGGTGC AGGGCATCCA GCGCGAAACG
AACACCACGA TCGAGATCGA GGAACGCGAC GGCGTGGGCG TGGTCACCGT GGCGGCCACG
AATCAGGAGA ACGCCCAGCG CGCCATCGAG ATGATCAAGC AGATCGTGGC CGTGCCCGAG
GTGGGCGCCG AGTACGAGGG CATCGTGCGC AGCATCCAGA GCTTCGGCGC CATCGTGGAG
ATCATGCCCG GCAAAGAAGG GCTGCTCCAC ATCTCGGAAC TGGACCACGG CTACGTGAGG
GACATCCACG ACTACCTGAA AGTCGGCGAC AAAGTCCGCG TCAAGTTGAT CGAAATCCGC
GAGGACGGCA AACTCCGTCT CAGCCGCAAG GCCTTCCTGC CGCCGCCGGA GCCCGAAGCG
AAAAACGGCG AGCCGGCACG CGAGCAGGCG AGCGCTGAGC GGAGCGGGCC GCCGCGTGAT
CACGCTTCCG GACGCTCCCA TGGACCCGGA CACGGCCGCG GAGGCCGGAG CGGACGGGGC
CGCGGACCGG ATCGCGGACG CGGTGGACGC CGTCGCTAA
 
Protein sequence
MMTQTTIHEI EFAPGKSLRL ETGRLAKQAN GAVVVRQGDT MVLCTAVLAD EPREGQSFFP 
LTVEYREKFA AGGRIPGGFI KREGRPTDKE ILSSRLIDRA IRPLFPDGFF HEVQIICYVI
SADDRYDADV LAGTGASAAL LLAGAPFDGP IAEVRVGRVD GQFVVNPTLK ELEQSDINLV
VAGKEDAIVM VEGEMKEVSE EDMLEALEVA HEAIRKLCRG QLEFVAAHGR PEPFPYQTTT
LPEELVARVR ELAVPKLEAH LRAPYDKQTF YEGLEQIGEE TVAALLGTTD AEGNQVLAEA
TPEGWTADQI RKAVSQVTRE VMRQMILREG RRIDGRSLDE IRPIWMEVGY LPRVHGSAIF
TRGETQVLAS VTLGTSKDVQ MIDQIFVQGD KRFFLHYEFP PFCTGEIRFL RGPGRREIGH
GYLAERALAA MLPDESSFPY TIRVNADVLE SNGSSSMASV CAGSLALMDA GVPVKKHVAG
VAMGLIKEGD QVAILTDILG TEDHLGDMDF KVAGTRDGIT ACQMDIKIGG LTREIMQRAL
EQARRARMYI LDLMEQTIEA PRPELSPYAP RLTQITIDPE FIGAVIGPGG RVVQGIQRET
NTTIEIEERD GVGVVTVAAT NQENAQRAIE MIKQIVAVPE VGAEYEGIVR SIQSFGAIVE
IMPGKEGLLH ISELDHGYVR DIHDYLKVGD KVRVKLIEIR EDGKLRLSRK AFLPPPEPEA
KNGEPAREQA SAERSGPPRD HASGRSHGPG HGRGGRSGRG RGPDRGRGGR RR