Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1314 |
Symbol | |
ID | 8567964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1540493 |
End bp | 1542811 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Polyribonucleotide nucleotidyltransferase |
Protein accession | YP_003290592 |
Protein GI | 268316873 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.122367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGACGC AGACAACCAT TCACGAAATC GAATTCGCCC CGGGGAAGTC ACTGCGCCTG GAGACGGGGC GTCTGGCCAA GCAGGCCAAC GGCGCTGTGG TCGTCCGCCA GGGCGACACG ATGGTGCTCT GCACGGCCGT GCTGGCCGAC GAACCCCGCG AGGGGCAGAG CTTTTTCCCG CTGACGGTCG AGTACCGCGA GAAATTTGCC GCCGGTGGCC GAATCCCGGG CGGCTTCATC AAGCGTGAGG GACGTCCGAC GGATAAAGAA ATCCTCTCCT CGCGCCTGAT CGACCGGGCC ATCCGGCCGC TTTTTCCGGA TGGCTTCTTC CACGAAGTGC AGATCATCTG CTACGTGATC TCGGCCGACG ATCGGTACGA CGCCGACGTG CTGGCCGGTA CGGGCGCTTC GGCCGCGCTG CTGCTGGCTG GCGCGCCCTT CGACGGACCG ATCGCCGAGG TGCGTGTGGG ACGCGTCGAC GGCCAGTTCG TGGTCAACCC CACGCTCAAG GAGCTCGAGC AGAGCGACAT CAACCTGGTG GTGGCCGGCA AGGAGGACGC CATCGTGATG GTCGAGGGCG AGATGAAGGA AGTCAGCGAG GAGGACATGC TTGAGGCCCT CGAGGTGGCG CATGAGGCCA TCCGCAAGCT CTGCCGGGGC CAGCTCGAAT TTGTGGCGGC GCACGGTCGT CCGGAACCCT TCCCGTACCA GACGACCACG CTTCCGGAGG AGCTGGTGGC GCGCGTGCGC GAACTGGCCG TGCCCAAGCT GGAAGCGCAC CTGCGTGCAC CCTACGACAA GCAGACCTTC TACGAAGGAC TGGAGCAGAT CGGTGAGGAG ACGGTCGCGG CCCTGCTGGG CACGACCGAC GCGGAAGGCA ACCAGGTGCT GGCCGAGGCC ACGCCCGAAG GGTGGACGGC CGACCAGATC CGCAAGGCGG TCTCGCAGGT GACCCGCGAG GTCATGCGCC AGATGATCCT GCGGGAAGGT CGCCGGATCG ACGGCCGCAG CCTGGACGAG ATCCGGCCGA TCTGGATGGA AGTGGGCTAT CTGCCCCGCG TGCACGGCTC GGCCATCTTC ACCCGCGGCG AAACGCAGGT GCTGGCCTCC GTGACGCTGG GCACGTCGAA AGACGTGCAG ATGATCGACC AGATCTTCGT CCAGGGCGAC AAGCGGTTCT TCCTGCACTA CGAGTTTCCG CCCTTCTGCA CGGGCGAGAT TCGCTTCCTG CGTGGACCGG GACGGCGCGA GATCGGCCAC GGCTATCTGG CCGAGCGGGC GCTGGCCGCC ATGCTGCCGG ACGAATCGTC GTTCCCCTAC ACGATCCGCG TGAACGCCGA TGTGCTGGAG TCGAACGGCT CCTCGTCGAT GGCCAGCGTG TGCGCCGGCT CGCTGGCGCT CATGGACGCC GGCGTGCCCG TCAAGAAGCA CGTGGCCGGC GTGGCCATGG GCCTGATCAA AGAAGGCGAC CAGGTGGCCA TCCTGACCGA CATCCTCGGC ACCGAAGACC ACCTGGGCGA CATGGACTTC AAGGTGGCCG GCACGCGCGA CGGCATCACG GCCTGCCAGA TGGACATCAA AATCGGTGGG CTGACGCGGG AGATCATGCA GCGCGCGCTG GAGCAGGCCC GTCGCGCCCG GATGTACATC CTGGATCTGA TGGAGCAGAC CATCGAAGCG CCGCGTCCAG AGCTTTCGCC ATATGCGCCT CGCCTGACGC AGATCACGAT CGATCCGGAG TTCATCGGCG CCGTGATCGG TCCGGGCGGC CGCGTGGTGC AGGGCATCCA GCGCGAAACG AACACCACGA TCGAGATCGA GGAACGCGAC GGCGTGGGCG TGGTCACCGT GGCGGCCACG AATCAGGAGA ACGCCCAGCG CGCCATCGAG ATGATCAAGC AGATCGTGGC CGTGCCCGAG GTGGGCGCCG AGTACGAGGG CATCGTGCGC AGCATCCAGA GCTTCGGCGC CATCGTGGAG ATCATGCCCG GCAAAGAAGG GCTGCTCCAC ATCTCGGAAC TGGACCACGG CTACGTGAGG GACATCCACG ACTACCTGAA AGTCGGCGAC AAAGTCCGCG TCAAGTTGAT CGAAATCCGC GAGGACGGCA AACTCCGTCT CAGCCGCAAG GCCTTCCTGC CGCCGCCGGA GCCCGAAGCG AAAAACGGCG AGCCGGCACG CGAGCAGGCG AGCGCTGAGC GGAGCGGGCC GCCGCGTGAT CACGCTTCCG GACGCTCCCA TGGACCCGGA CACGGCCGCG GAGGCCGGAG CGGACGGGGC CGCGGACCGG ATCGCGGACG CGGTGGACGC CGTCGCTAA
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Protein sequence | MMTQTTIHEI EFAPGKSLRL ETGRLAKQAN GAVVVRQGDT MVLCTAVLAD EPREGQSFFP LTVEYREKFA AGGRIPGGFI KREGRPTDKE ILSSRLIDRA IRPLFPDGFF HEVQIICYVI SADDRYDADV LAGTGASAAL LLAGAPFDGP IAEVRVGRVD GQFVVNPTLK ELEQSDINLV VAGKEDAIVM VEGEMKEVSE EDMLEALEVA HEAIRKLCRG QLEFVAAHGR PEPFPYQTTT LPEELVARVR ELAVPKLEAH LRAPYDKQTF YEGLEQIGEE TVAALLGTTD AEGNQVLAEA TPEGWTADQI RKAVSQVTRE VMRQMILREG RRIDGRSLDE IRPIWMEVGY LPRVHGSAIF TRGETQVLAS VTLGTSKDVQ MIDQIFVQGD KRFFLHYEFP PFCTGEIRFL RGPGRREIGH GYLAERALAA MLPDESSFPY TIRVNADVLE SNGSSSMASV CAGSLALMDA GVPVKKHVAG VAMGLIKEGD QVAILTDILG TEDHLGDMDF KVAGTRDGIT ACQMDIKIGG LTREIMQRAL EQARRARMYI LDLMEQTIEA PRPELSPYAP RLTQITIDPE FIGAVIGPGG RVVQGIQRET NTTIEIEERD GVGVVTVAAT NQENAQRAIE MIKQIVAVPE VGAEYEGIVR SIQSFGAIVE IMPGKEGLLH ISELDHGYVR DIHDYLKVGD KVRVKLIEIR EDGKLRLSRK AFLPPPEPEA KNGEPAREQA SAERSGPPRD HASGRSHGPG HGRGGRSGRG RGPDRGRGGR RR
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