Gene Rmar_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1311 
Symbol 
ID8567961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp1538374 
End bp1539123 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID 
ProducttRNA pseudouridine synthase B 
Protein accessionYP_003290589 
Protein GI268316870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0354136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCTC CGCTGCCGGA GAACCCTGAC GCGCTGGTGT ACGGCTATCC CCGGCTGCCC 
GAGCGATGGG ATGCCGCCGT GCTCCTGATC GACAAGCCGA AAGGCATCAC CTCCTTTGAC 
GTGATCCGGC GGCTCCGGAA ACTGCTGCGC GTGCGCAAGA TCGGACATGC CGGCACGCTC 
GATCCCATGG CCACCGGCCT GCTGATCTGT TTGATCGGGC GGGCCACACG CTGGATGACG 
CACTTTATGG CCCAGGAGAA GGAGTACGAG GGTGTCATGC GACTCGGCGA GATCACGCCC 
TCGTACGACG CCGAAACCGA GGTGGTGGAG CGCAGGTCCT GGGAACATCT CACCGATGCG 
GATCTGGAGC GGGTGCGTCA TCAATTTGTC GGAGAGATCG TGCAGCAGGT GCCAGCCTAT 
TCGGCCGTCA AGGTGAAAGG CAAACGCCTG TACGAACAGG CCCGGGCCGG GAAAGCGGTC 
GAACGCCCGA GTCGGCGCGT GCAGATTTAC GCGTTTGAAC TGCTGGGGCG TGACGGGGCC 
GACGTGGCCT TTCGGGTGCG CTGTTCAAAG GGCACGTACA TCCGCAGTCT GGTGCACGAC 
TTCGGGCAGG CGCTGGGGTG CGGCGCTCAT CTCGTCGAAC TGCGGCGCAC CCGATCGGGA 
CCGTATCGCG TTGAACAGGC CTGGACGCTG GAGGCGCTGG CCGAGGCGCT GCAAGCCCGG 
ACATCATCCC AGCCGGAAAG AAAGTCATGA
 
Protein sequence
MPAPLPENPD ALVYGYPRLP ERWDAAVLLI DKPKGITSFD VIRRLRKLLR VRKIGHAGTL 
DPMATGLLIC LIGRATRWMT HFMAQEKEYE GVMRLGEITP SYDAETEVVE RRSWEHLTDA 
DLERVRHQFV GEIVQQVPAY SAVKVKGKRL YEQARAGKAV ERPSRRVQIY AFELLGRDGA 
DVAFRVRCSK GTYIRSLVHD FGQALGCGAH LVELRRTRSG PYRVEQAWTL EALAEALQAR 
TSSQPERKS