Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1308 |
Symbol | |
ID | 8567958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1533918 |
End bp | 1535183 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | NusA antitermination factor |
Protein accession | YP_003290586 |
Protein GI | 268316867 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.17701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGAACA GCGAGCTGGT ATCTTCCTTT GCGGAAATCG CGCACTCGAA GGGAATCGAC CGGGATACGC TCCAGCTGAT CGTGGAGGAC GTCTTCCGGG CCATGATCCG GAAGCGTTAC GGCTCGGACG AAGCGTTCGA GATCATCTTC AACCCGGATC ATGGCGACAT CCAGATCCTC CACATCCGGG AAGTCGTGCC CGACTGGGAG CTGGAAGACC CGGTCACGCA GATTGAGCTG AGCGAAGCGC GCAAGATCGA CCCCGATTTT GAGGTCGGCG ATGAGGTAGC CAGCGAGGTG AACATCGCCG AGTTCGGTCG GCGGGCCATC ATGACCGCGC GCCAGACCTT CAGCCAGCGT ATTCGCGATT TGGAGAAGGA AAAAATCTAT CAGGAATATT CCGAACTGAT CGGCGAGATC GTCGTCGGCG AAATCTATCA GATTCGCCGG CGCGAGGTGC TGGTCATGCA CAACCGCACG GAGCTGATTC TACCGCGCGA GGAGCAGATC CCGCGCGATC GTTACCGCAA GGGCGACACG CTCCGGGCGA TCGTCAAAGA GGTGCGTCGT GAGGCGGGCG GTGCGCCGCA GGTGATCATC AGCCGGGCCG ATCCGGTCTT CCTGGAGCGG CTGCTGGAGC TCGAAGTGCC CGAAATCGAA GAGGGGATCG TAGAGGTCAA GAAGATCGTG CGGGAGCCCG GCGAGCGCGC CAAGGTGGCC GTCGTCAGCC ACGACGAGCG GGTGGACCCA GTGGGCGCCT GCGTGGGTCT GCGGGGGAAC CGGATCCATG CCATCGTGCG CGAACTCTCC AACGAGAACA TCGACGTCAT CGAGTGGTCC GACGACCCCC GGGAGCTGAT CAAGCGGGCG CTGACGCCGG CCAGACCGCT TTCGGTCACG TTGAACGAAG AGGCCAACCC GCCGCGTGCC AAGGTGGTCG TGCGGGCCGA CGAGGTCAGC CAGGCCATCG GGCGGGGCGG GGTCAACATC CGGCTGGCCT CGCGGCTGAC CGGCTATGAA CTGGACGTCT ACCGGGAAAT CCGCCCCGAC GAAGAGGATA TCGAAATCGA AGAGTTTGCC GACGAGTTGG ACGAAGAGAT CATCGCGCGG CTGCGCGAGA TCGGTTGCGA TACGGCCCGG GCCGTGCTCG ACCTTTCGGT CGAAGAGCTG ATGCGGCGCT CCGGGCTCGA TGCCGAAACC GCGCGGCGCG TGATGCATGT CATTCGTTCG GAATTTGAAG AAGACGAAGA AGAACTGGAA GGCTGA
|
Protein sequence | MQNSELVSSF AEIAHSKGID RDTLQLIVED VFRAMIRKRY GSDEAFEIIF NPDHGDIQIL HIREVVPDWE LEDPVTQIEL SEARKIDPDF EVGDEVASEV NIAEFGRRAI MTARQTFSQR IRDLEKEKIY QEYSELIGEI VVGEIYQIRR REVLVMHNRT ELILPREEQI PRDRYRKGDT LRAIVKEVRR EAGGAPQVII SRADPVFLER LLELEVPEIE EGIVEVKKIV REPGERAKVA VVSHDERVDP VGACVGLRGN RIHAIVRELS NENIDVIEWS DDPRELIKRA LTPARPLSVT LNEEANPPRA KVVVRADEVS QAIGRGGVNI RLASRLTGYE LDVYREIRPD EEDIEIEEFA DELDEEIIAR LREIGCDTAR AVLDLSVEEL MRRSGLDAET ARRVMHVIRS EFEEDEEELE G
|
| |