Gene Rmar_1300 details

Gene Information

• Locus tag: Rmar_1300
• ID: 8567950
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1523408
• End bp: 1524127
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 63%
• Product: Rhomboid family protein
• Protein accession: YP_003290578
• Protein GI: 268316859

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCCTA TTGGCGACGA CGTGCCCGAG CGGCACTACC CGTTCGTGAC CTACACGCTG 
ATCGGGTTGA ACGTCTTCTT TTTCTTCGTG GAACTGCTAC AGGGGCCGCG CCTGGAGGCC 
TTCCTGTATC GCTGGGGGAC TGTACCGGCC TGGATCATGA ACTGGCAGGA GCGGCCCGAA 
GTGCTCCTGA CGCTCTTCAC GTCCATGTTC CTGCACGGCG GCTTTGCCCA CCTGATTGGC 
AACATGATCT ACCTGAACGT CTACGGCAAG TCGCTTGAGG GGACGATCGG CTCCGGGCGC 
TTTCTGGTGT TCTATCTGCT CAGCGGCCTG GCCGGAGGCA TTGCGCACGT GCTCATGAAT 
CCCACGAGCA CGGTGCCGGC CATCGGAGCC AGCGGAGCCA TCTCGGGCGT GCTGGGCGCC 
TACCTGGTGC TGTTTCCGCG GGCGACGGTC TTTCTGGTGG TGCCGTTGCT GTTCTTTTTC 
CCGATCGTGG CGCTTCCGGC CGTTTTCGTG CTGACCTGGT GGTTTGCGCT CCAGATCGTG 
GGTGGATTGA CGTCGGCCGC GTTCACGCAG GTGGGCGGCG GCGTGGCCTA CTGGGCCCAC 
ATCGGCGGCT TTGTGGCCGG ATTTCTGCTC ATCGGCCTGT TCTATTCGCG GAAGCAGCGA 
CAGCCTTTCC GCTACTACGG TGTGCCGGAT CGGCGCTACT GGGCCTACCG GGAAGGCTGA 

 

Protein sequence

MIPIGDDVPE RHYPFVTYTL IGLNVFFFFV ELLQGPRLEA FLYRWGTVPA WIMNWQERPE 
VLLTLFTSMF LHGGFAHLIG NMIYLNVYGK SLEGTIGSGR FLVFYLLSGL AGGIAHVLMN 
PTSTVPAIGA SGAISGVLGA YLVLFPRATV FLVVPLLFFF PIVALPAVFV LTWWFALQIV 
GGLTSAAFTQ VGGGVAYWAH IGGFVAGFLL IGLFYSRKQR QPFRYYGVPD RRYWAYREG