Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1292 |
Symbol | |
ID | 8567942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1515517 |
End bp | 1517679 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ribosomal protein S1 |
Protein accession | YP_003290570 |
Protein GI | 268316851 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGACG AACAGAAGCA GGAACAGGCA ACCCAGGTCT CTGAAATGCC AGAGACGCCC GAAAAACCGC AGGAGGAAGC ACCGCAGCCT GAAGCAGAAA CGGCTACGAC ACCCGAAGCG GCCCAGCCTG AGGCCGCCGA AACACCGGAG GCCACCGGGG CTCCGGTAGC CGAGGCCGAA GCCGAACCGG AGCCTGTGGC TGAAGCCCCG GCGCAGAAGA CGCGTCCGGT CCTTGGCTTC AAGGGCGAGA TCACCGGCCC GGTCGTGAAG CTGGAAGACC TTGAAAAGCA GCAAGAAGCG CGCGAGGTCG ATCCCTTCCA CGAGCAGCTC CTCCGGCAGA TCGAAGAGAG CTTCACGACC GTTAACGAGG GCGAGATCGT CAAGGGCCGC ATTCTGGCCG TCGGCGAGAA GGAGGTCATC ATCGACATCG GCTTCAAGAG CACCGGCATC GTCTCGCGCA ACGAGTTTGG CGACGCGGAG ATCAAGCCGG GCGACGAGGT AGAGGTCTTC GTCGAAAGGC TGGAGGACGC GCAGGGTCAG CTCGTGCTGT CGAAGCTCAA GGCCGATCGC GTCCGGCGCT GGGAGCGTGT CGAGGACGCC TACTACAACG AAAAGGTCAT CGAGGGTACG ATCGTGCGCC GCGTCAAGGG CGGCATGATC GCCGAAATCT TCGATGGCCT GGAAGCCTTC CTGCCGGGTT CTCAGATCGA CGTGCGGCCC GTGCGCGACT TCGACGCCTA CATCGGCAAA CGCATGGAGT TCAAGATCGT CAAGATCAAC CCGGCCAACG AAAACGTCGT CGTCTCGCAC CGGGCCCTGC TCGAGAAAGA GCTCCAGAAG CAGCGCGAGG AGATTCTCTC GAAGATGGAG CCCGGTCAGG TGCTCGAAGG CACCGTCAAG AATATCACGG ACTTCGGCGT CTTCATCGAC CTGGGCGGCG TCGACGGCCT GCTGCACATC ACGGACCTCT CCTGGGGTCG CGTTTCGCAT CCGTCGGAAC TGGTGCAGCT CGGCCAGAAG CTCAACGTCG TCGTCCTCGA CTACGACAAG GAGCGCCAGC GTATCTCGCT GGGTCTGAAG CAGCTCCAGC CCCATCCCTG GGAGAACATC GACGAGAAGT ACAAGGAAGG CGACGTGGTC GAGGGCAAGG TGGTCTCCAT CACGGACTAC GGCGCCTTCG TCGAGCTGGA GAAGGGGATC GAGGGGCTGG TGCACATCTC CGAGATGAGC TGGACCGACC ACATCAAGCA CCCGAGTCAG AAGGTCTCGC TTGGCCAGCT CGTCAAGGTG AAGATTCTGA ACATCGACCG CGAGGGCCGG AAGATCTCGC TCGGCATGAA GCAGCTGGAG CCCAACCCGT GGGAGGGGCT CTCCAAGCGC TACCCGCCGG GCACGGTGCT GCGCGGCAAG GTCCGCAAGA TCACCAACTT CGGCGTCTTC GTCGAGATCG AGCCGGGCAT CGACGGACTC GTCCACATCA GCGACCTGTC GTGGACGCGC CGCATCCAGC ACCCGAGCGA AGTGGTCAAG GAAGGGGAGG AGCTGGATGT CGTGGTGCTG GAGGTCGATG AGGAAAACCG GCGCATCTCG CTGGGCCACA AGCAGGTGCA GACGAACCCG TGGAACGACT TCGCCACGGT CTATGCGGAA GGCACCGACC ATAAGGCCAG AGTGGTGCGG ATTGAAGACA ACGGTCTGGT GGTCGAGCTT CCGCTGGGCG TCGAGGCCTT CGTGCCGGCC GGCGAGCTCA AGCACAGCAA GAACTTCCAG GAGTTCTACC ACGTGGGAGA CGAGCTGGAG CTGCGCGTGG TCCGTTTCAG CGCCGCCGAC CGGGAGATCG TCATGAGCGA GGTGGCCAAG GAGCGCGCCG AAGAGGAGGC GCAGCGGGCC GAAGAGGAAC GGCGTCGCCG CGAAGAGCGC AAGCAGCAGG AAAAGGCCGT CAAGGAGTAC CAGCGCAAGG CGGTCACCGG ACCCACCACG TTGGGTGAGC TCAGCGGCCT GGAAGACCTG AAGGCACAGC TCGAAGCGGC CGAGAAGGCG GCGCAGGAGG CATCGGCCGA GACGGAAGAA GCTCCCGAAC AGCCGGCCGC CGAGGCGCAG GCCCCTGAGG CCGAAACCGG GGAAGAGCCT TCGGACGAGA CCTCCGAAGA CAAGAAAGAC TGA
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Protein sequence | MADEQKQEQA TQVSEMPETP EKPQEEAPQP EAETATTPEA AQPEAAETPE ATGAPVAEAE AEPEPVAEAP AQKTRPVLGF KGEITGPVVK LEDLEKQQEA REVDPFHEQL LRQIEESFTT VNEGEIVKGR ILAVGEKEVI IDIGFKSTGI VSRNEFGDAE IKPGDEVEVF VERLEDAQGQ LVLSKLKADR VRRWERVEDA YYNEKVIEGT IVRRVKGGMI AEIFDGLEAF LPGSQIDVRP VRDFDAYIGK RMEFKIVKIN PANENVVVSH RALLEKELQK QREEILSKME PGQVLEGTVK NITDFGVFID LGGVDGLLHI TDLSWGRVSH PSELVQLGQK LNVVVLDYDK ERQRISLGLK QLQPHPWENI DEKYKEGDVV EGKVVSITDY GAFVELEKGI EGLVHISEMS WTDHIKHPSQ KVSLGQLVKV KILNIDREGR KISLGMKQLE PNPWEGLSKR YPPGTVLRGK VRKITNFGVF VEIEPGIDGL VHISDLSWTR RIQHPSEVVK EGEELDVVVL EVDEENRRIS LGHKQVQTNP WNDFATVYAE GTDHKARVVR IEDNGLVVEL PLGVEAFVPA GELKHSKNFQ EFYHVGDELE LRVVRFSAAD REIVMSEVAK ERAEEEAQRA EEERRRREER KQQEKAVKEY QRKAVTGPTT LGELSGLEDL KAQLEAAEKA AQEASAETEE APEQPAAEAQ APEAETGEEP SDETSEDKKD
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