Gene Rmar_1290 details

Gene Information

• Locus tag: Rmar_1290
• ID: 8567940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1513975
• End bp: 1514577
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 65%
• Product: tRNA/rRNA methyltransferase (SpoU)
• Protein accession: YP_003290568
• Protein GI: 268316849

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCAAAC TGGCCCACCA CGAAATTCCT CGTCCCGATC CCGAAACGCT GCGACGGTTG 
CCCCGCCACC CGATCGTGGT GGTGCTGGAC AACATTCGTT CGATTTATAA CGTCGGTTCC 
ATCTTCCGCA CCTCCGATGC CGCCCGCATC GAGAAGCTCT ACCTGACCGG GATCACGGGC 
ACTCCCGAAC ATCGCCAGCT CCACAAGACG GCGCTGGGCG CCGAGGAAAC CGTACCCTGG 
GAGTACGTGC GCGATCCCGT GCCGCTGGTC GCGTCGCTCC GCAAGGCCGG CTATACGATC 
GCCGCGCTCG AACTGACCGA CACGCCCACC TACACGCACC AGTTGCCGGA CGACATCTTC 
CCGCTGGCGC TCATCGTCGG CCATGAACTT TACGGCGTGC AACCGGCGCT GATCGAACGG 
GCCGACCTGG CGCTCGAGAT TCCCCAGTTC GGAAGCAAGC AGTCGCTCAA CGTGGCCGTG 
GCCTACGGGA TTGCCGTGTT CGACCTGGTG CGGCACTACC GTCGGCTCCA GGGCGACCCG 
CGCTTCAGCC CAGCACCTCG GCAGCCCGAC GGAGCCGTCG CACACACGCC TCCTTCCCGA 
TGA 

 

Protein sequence

MRKLAHHEIP RPDPETLRRL PRHPIVVVLD NIRSIYNVGS IFRTSDAARI EKLYLTGITG 
TPEHRQLHKT ALGAEETVPW EYVRDPVPLV ASLRKAGYTI AALELTDTPT YTHQLPDDIF 
PLALIVGHEL YGVQPALIER ADLALEIPQF GSKQSLNVAV AYGIAVFDLV RHYRRLQGDP 
RFSPAPRQPD GAVAHTPPSR