Gene Rmar_1288 details

Gene Information

• Locus tag: Rmar_1288
• ID: 8567938
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1510267
• End bp: 1512321
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 66%
• Product: PpiC-type peptidyl-prolyl cis-trans isomerase
• Protein accession: YP_003290566
• Protein GI: 268316847

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTACGG TCTGCTTGCT GCTCGGTAGT CTGCTGATGC TGGCGGCGGG TTGCCGCACG 
CTTCAGACAA ATCCGGCCGA GAATCCGGAA GTCGTGGCCG TGGCCGGCTC GGAAGTGATC 
GATCTGACCA CGTTCGAAGA CCAGTATGCC CGTTCGGTGG GCAACCGGCT GGAAGCGGCC 
GACGATTCGC TGCAGGCCTA TCAGGACTTC CTTGAGCGCT ACGTGAACTA CCGACTGCGC 
GTGCAGGAGG CCCGCGCCCG GGGGTACGAT CGCGACTCGG CCATCGTGGC CGAAGCGTCG 
GCCTACCAGC TCGAGCTGGC CCGCAACCAC CTGATGCGCC AGGAGGTCAT CGAACCGCTG 
CTGCGCACGC TCTACGCGCG CATGCCCGAC ATGGTGGACA TCAGCCACAT CTTCGTGCGT 
GTTCCGACCG ACGCCACCCC CGAAGATACG CTGGCCGCCT ACCGGCGCCT GCAGGCGTTG 
ATCGATTCGG TTCGCCAGGG CGCCGACTTC AACGAGATCG CCTTCCGCCA CTCGGACGAC 
CCGTCGGCCA GATCGCCTCG CTCTACCCGG GGCGGCTGGG GGCACATCGG CTGGATCAAG 
ATGGGCCAGA CGATCGAGCC GATGGAGACC TATGCATTCA ACACGCCCGT CGGGGAACTG 
TCGCCCATCT TTCGGACGCG CTACGGCTAC CACGTGCTGA AGGTGCACGA CCGGAAGCCG 
GCTCCCTACG ACGTGCGCGC CGCCCACATC ATGATCACGC CCGCTCCCAC GCCCGAAGAT 
TCGGCCCGCG TGCGTCGCAC GCTCGACAGC CTGCGCCAGC TCGTCCTGAG CGGAAAGGCC 
GACTTTGCCG AACTGGCCCG CCAGCATTCC GAAGACTGGC GCACGAAGAG CCGGGGGGGC 
GACCTGGGCT ATCTGAGCTT TGCGCAACCC ATGCCGGTCA TGGTGCGCGA CACGCTCTTC 
GCCCTGAAAG AAATCGGCGA CGTGTCGCAC ATCGTCACCA CCCCGTTCGG GCTGCACATC 
TTCCAGCTCA AGGATCGGCG TCCCATTCCG CCCACGTTCG AGGCGGCCTA CGATACACTG 
TTGACCGTGG CCGACCGGCT GGGACGACTG CAGGAAGCCC GCAATCGATT CGTCGCGCAG 
CTCCGCCGCC GGTTGCATGT CCGGCTCGAC ACGGCACAGC TTTTTACGCT GCTGCAGGTG 
GCCGCCCATC CCGATACGCT GGCGCTGCGC GTCAGCCGTC GCGAGCTGGG CGCGCTCGAC 
CTGAGCCAGC CGTTTGCCTC CGTTGAGGAT TCCTCCTACA CGCTGGCCGA GCTGATCGAT 
TACATCAACC AGCAGAACCT GCTGCGCCGC ACCTCGCGCC GCGACACCAT CGCACAGGAA 
CGCCTGCTGC GGGCGGCCGA CCGCTTCCTT GACGACCGGG TGCTCAGCTA CGAAGCGCTG 
CGGCGGGCCG AGCAGGATCC TGAATTTCAG CGCACCATGC AGGACTTCAT CGACGGGCTG 
CTGGCTTTCA AGCTGCTGGA AGAGGCCGTC TGGAAAGTGG CCGAGCGCGA CACGGCCGGA 
CTCCGCGCCT ATTACGAAGC GCATGCTGGC GAATTCGTCT TTCCGGAGCG CACGCGCGTG 
CTCAGCTTCC GCACCCAACG CGATTCGGTG CTGGAGCAGC GCGTCTACGA GCCCCTGCAG 
CAGGGCGTGC CGGTAGCCCG ACTGATCGCC GAACTGACGG CCGACAGCAG CGCCGGCATC 
ACGGTCGATA CCGTCTACAT CGAAAAGCCC ACGGGTTCCT TCTACGACCG GGCGCTGCGC 
CTGGAAGCCG GCCGCTACAC CGAACCGTTC CGCTACTGGA ACGGACACGT GCTGCTCTAC 
AACGACGGCC TGGAGCCGCC ACGCCCCAAG ACGTTCCGCG AAGCCCGCGC CGACGTGCTC 
AGCGCCTACC AGAAGGAACT GGAAGCCCGA CTGGATCAGG GGCTGCGCGC GCGTTACGGA 
GCCCGGATCT TTCCGGAGCG TCTGCGCCAG GCCTTTGCGG CCGAACGTCG GACGCTTGCC 
AACGCCGGTC AATGA 

 

Protein sequence

MRTVCLLLGS LLMLAAGCRT LQTNPAENPE VVAVAGSEVI DLTTFEDQYA RSVGNRLEAA 
DDSLQAYQDF LERYVNYRLR VQEARARGYD RDSAIVAEAS AYQLELARNH LMRQEVIEPL 
LRTLYARMPD MVDISHIFVR VPTDATPEDT LAAYRRLQAL IDSVRQGADF NEIAFRHSDD 
PSARSPRSTR GGWGHIGWIK MGQTIEPMET YAFNTPVGEL SPIFRTRYGY HVLKVHDRKP 
APYDVRAAHI MITPAPTPED SARVRRTLDS LRQLVLSGKA DFAELARQHS EDWRTKSRGG 
DLGYLSFAQP MPVMVRDTLF ALKEIGDVSH IVTTPFGLHI FQLKDRRPIP PTFEAAYDTL 
LTVADRLGRL QEARNRFVAQ LRRRLHVRLD TAQLFTLLQV AAHPDTLALR VSRRELGALD 
LSQPFASVED SSYTLAELID YINQQNLLRR TSRRDTIAQE RLLRAADRFL DDRVLSYEAL 
RRAEQDPEFQ RTMQDFIDGL LAFKLLEEAV WKVAERDTAG LRAYYEAHAG EFVFPERTRV 
LSFRTQRDSV LEQRVYEPLQ QGVPVARLIA ELTADSSAGI TVDTVYIEKP TGSFYDRALR 
LEAGRYTEPF RYWNGHVLLY NDGLEPPRPK TFREARADVL SAYQKELEAR LDQGLRARYG 
ARIFPERLRQ AFAAERRTLA NAGQ