Gene Rmar_1273 details

Gene Information

• Locus tag: Rmar_1273
• ID: 8567922
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1493219
• End bp: 1495165
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 63%
• Product: DNA topoisomerase (ATP-hydrolyzing)
• Protein accession: YP_003290551
• Protein GI: 268316832

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.804783
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAGC TTGCGGCAAC CTATACGGGC AAGGACATCC AGGTACTGGA AGGGCTGGAG 
CCGGTGCGGA AGCGGCCGGG CATGTACATC GGCGGCACCG GCAAACCCGG CCTGCATCAC 
CTGCTCTGGG AGATCGTCGA CAACGCGGTG GACGAGGCCG TCAACGGCTT CGCCTCGCTG 
ATCGAGGTGA CGCTGCACGC CGACGGCCGG AGCGTTACGG TGACGGACAA CGGCCGGGGG 
ATCCCCGTCG ATCCGCACCC GGTCAAGAAG ATCCCCACGC TGGAGCTGAT CCTCACCACG 
CTTCACGCCG GCGGCAAGTT CGATCGAAAG AATTACATCA CTTCGGGCGG ACTCCACGGC 
GTGGGCGCTT CGGTGGTGAA CGCGCTCTCG GAGGAGCTCG TCGCCACGGT GAAGCGCGAC 
GGGAAGACCT ACCAGCAGCG CTTCGTGCGC GGCAAGCCGA AAACGAAGCT GAAGGTCGTT 
GCCGAAAACA CGCGCGGCAC CGGCACCAGC ATCTATTTTC GTCCCGACCC GGAGATTTTC 
GAAACCACCG AGTTCGATCC GGTCTGGATC CGGGAGCATC TGGAGATCAA GACGTACCTG 
AACCGTAACC TGAAGATCGT TTTCAAGGAC GAGACGAGCG GGGAACGGTA CGAATTCCAT 
CACGAAGGAG GAATCGTCGA GTATCTGGCG CGACTGGTCG AGGAGCAGGG CGCGCGCGTG 
GTGCATCCCG AACCGTTCGT GCTGATTCAG GAGGAGTTGC GCGACGGAGC CCGCTTGGAG 
GTGGCCCTTC AATGGACCGA GGCCCCGCGC GAGCTGATCA AGTCGTTCGT CAACGGGATT 
CCTACCACCG AGGGTGGCAC ACACGAACAG GGCTTCAAGG AGGCCGTGAG GAGTGCCGTG 
CGGGCCTACA TGGAGACGCA CGACCTGCTA CCGCGTAATC TGGAGGTGAC GGCCGACGAC 
ATCCGCGAAG GGCTGGTGGC CGTCGTCAAC CTGTTCATGG TGGAGCCTCA GTTCCAGGGC 
CAGACCAAGG AAAAACTGAA CAACCCGGAG GCCCGATCGC TGGTGATCGG GGCGGTGCGG 
CTGGACCTGG AGCAGTTCCT GAATGCCCAC CCGACAATGG CCGAGGCCAT CGTGGCCCGG 
ATCATTCAGG CCGCTAAAGC CCGGCTGGCC AGCCGGGCGG CCGCCCGCTC GGTGCGCCGT 
CAGAGTTCGG TCAGCCACCG GCTGAACCTT CCCGGCAAAC TGGCCGACTG CACCTCGACA 
AATCCTGAAG AGTGCGAACT GTTCATCGTC GAGGGCGACT CGGCCGGTGG CAGTGCCAAG 
CAGGCCCGCG ACCGGCGCTT CCAGGCGGTA TTGCCGCTGC GCGGCAAGGT GCTGAACGCC 
GAGCAGGCTT CGCTGCGCAA GGTCGAGGAA AACAAGGAGT TGTCCAACAT CGTGCAGGCA 
CTGGGATGTG GCATCGGGGA TAAAATCGAT CTCTCCCGCC TGCGCTATCA TAAAATTATC 
CTGCTCATGG ACGCCGACTC GGACGGCCAT CACATCACGA CGCTGCTTCT GACGTTCTTC 
TACCGCTACA TGCGGCCGCT CATCGAAAAC GGGCACGTGT ACGTGGCCCA GCCGCCGCTG 
TACCGAATCG ACGCCGGCAA AGAGACCTAC TGGGCCCTGG ACGACGCCGA CCGCGACCGC 
ATTCTGCAGG AGCTGCGCAA AAAGCGGAAG AACGTGCAGG TGGAAATCCA GCGCTTCAAG 
GGGCTGGGCG AGATGATGCC CGACACGCTG CGCGAAACCA CGCTGGATCC CCGGAAGCGC 
CGCCTGCTGC GCGTCGAGAT TCCGGAAGAC GCCCGCCTGT TGACCGAGCA GACCATCACC 
GAGTTGATGG GGCGCGACGT CTCGGCCCGC TTTCGGTTCA TCATGGAAAA TGCCGCTCAG 
GTCGACGCCG AGGCGCTCGA CGTGTAA 

 

Protein sequence

MAELAATYTG KDIQVLEGLE PVRKRPGMYI GGTGKPGLHH LLWEIVDNAV DEAVNGFASL 
IEVTLHADGR SVTVTDNGRG IPVDPHPVKK IPTLELILTT LHAGGKFDRK NYITSGGLHG 
VGASVVNALS EELVATVKRD GKTYQQRFVR GKPKTKLKVV AENTRGTGTS IYFRPDPEIF 
ETTEFDPVWI REHLEIKTYL NRNLKIVFKD ETSGERYEFH HEGGIVEYLA RLVEEQGARV 
VHPEPFVLIQ EELRDGARLE VALQWTEAPR ELIKSFVNGI PTTEGGTHEQ GFKEAVRSAV 
RAYMETHDLL PRNLEVTADD IREGLVAVVN LFMVEPQFQG QTKEKLNNPE ARSLVIGAVR 
LDLEQFLNAH PTMAEAIVAR IIQAAKARLA SRAAARSVRR QSSVSHRLNL PGKLADCTST 
NPEECELFIV EGDSAGGSAK QARDRRFQAV LPLRGKVLNA EQASLRKVEE NKELSNIVQA 
LGCGIGDKID LSRLRYHKII LLMDADSDGH HITTLLLTFF YRYMRPLIEN GHVYVAQPPL 
YRIDAGKETY WALDDADRDR ILQELRKKRK NVQVEIQRFK GLGEMMPDTL RETTLDPRKR 
RLLRVEIPED ARLLTEQTIT ELMGRDVSAR FRFIMENAAQ VDAEALDV