| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1260 |
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| Symbol | |
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| ID | 8567909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1475403 |
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| End bp | 1479938 |
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| Gene Length | 4536 bp |
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| Protein Length | 1511 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_003290538 |
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| Protein GI | 268316819 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.179185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGC AGAACCAGAA CCCTGATTCT CATCACCGCT CGCTGTTTAG CGCTCAGGAG
CAAGACGCCT GTGGCGTCGG TCTGATCTGT ACGCTGACGG ATGCCCCTTC CCACACCATT
GTGCAGGACG GCCTGCAGGT GCTGCTGCGC CTGAGCCATC GTGGTGCCTG CGGTTGCGAC
GAGCGCACGG GCGACGGGGC GGGCATCCTT GTGCAACTCC CAGATCTGTT CCTCCGGGAG
GTGGCCCTGG AGGAGGGCGT TCGGCTGCCC GAACCCGGCG CCTACGCGGT GGGCATGCTC
TTTCTGCCGA AAGATCGCGC GCGCCAGCAG GCCGGCCGGG AGGCCTTTGA GGGACTGGTG
CAGGCCGAGG GGCAGCAGGT GCTGGGCTGG CGTCGTGTGC CCACGCGCCC CGAAGTGCTG
GGTGTGTCGG CGGCCGCCGT CGAGCCGGCC GTCTGGCAGG TGTTCGTGCA GGCGGGCCCG
GGGCTCGACG TGGAGGCCTT CGAGCGCAAG CTGTTTGTGA TCAAGCGTCG GGCCCGGCAT
GTTATCGACG ACCCGGACTT CTACGTGGTC AGCCTGTCGG CGCGCACGCT GGTCTACAAG
GGCATGCTCA TGCCCGATCA GTTGGGCGTC TATTACCCGG ACCTGACCGA CCCGCGTTTT
GCCAGCCGAT TGGCTCTGGT GCACTCGCGT TTCAGCACGA ACACCTGGCC GCGCTGGCCG
CTGGCCCAGC CCTTCCATCT ACTGGCGCAC AACGGCGAAA TCAACACGCT GCGGGGTAAC
ATCAATGCGC TACGGGCGCG CGAGGCGCTG TTGCGCTCGG AACTGCTGGG CGACGATCTG
GCCAAGGTGC TGCCGCTGCT CGACGAATCG GGCAGCGACT CGCAGATGCT CGACGCCATG
ATCGAGCTGC TCTACCGGGC CGGTCGTTCG CTCCCGCACG CCATTCTGAT GACCATTCCG
GAGGCCTGGG CGCACGACGA CTATATGGAC GACGCGCGCA AGGCCTTCTA CGAATACCAC
GCCTGCCTGA TGGAGCCCTG GGACGGTCCG GCCGCCGTCT GCTTCACCGA CGGTCGCTAC
GCCGGGGCCG TGCTCGACCG CAACGGGCTG CGCCCGGCCC GCTACACGAT CACCCGCGAC
GGGCTCGTCG TGCTGGCCTC CGAAGTGGGT GTGCTCGATC TGGAGCCCGA ACGCGTCGTC
GAAAAAGGCC GGTTGCAGCC CGGACGCATG TTCCTGGTGG ACCTGGAGGA AGGCCGGGTT
GTGCGGGATG AGGAGATCAA AGCCACGCTG AGTCGTCGCC GGCCCTATCG TCTCTGGCTC
CGGTCGCACC TGCGCACCGA AGCGGATCTG CCCCGGGCCC AGGCCCTGCC GCGGACCTCG
GATCTGGAAT CGCTGCGGCG CCAGCAGCGG CTCTTTGGCT ACTCGCTCGA GGAGCTGCGC
ATGATCCTGG CGCCCATGGC GCAGAAGAAG GATGATCCCG TCGGGTCCAT GGGCGACGAC
ACGCCGCTGG CCGTGCTGTC GGACTTTCCG CGGCTGACCT ACGACTACTT CAAGCAGCTC
TTCGCGCAGG TGACCAACCC GCCCATCGAC GCCATCCGCG AAGAGCTGGT TACCTCGCTG
CATACGTATC TGGGCGGCGA GGCCAACCTG TTGGACGAAA CGCCCGAACA GGCGCACCGG
CTGCGTCTGG AGCATCCGGT GCTGACCCCG GAAAAACTGG CCCGTATCAA GGCGCTGGAC
GAAGAGAACC TGCGGGCCAC CACGCTCAGC ACCACGTTCG ACGTCAAAGC CGGCGGTGAA
GGCCTGGTGG CCGCGCTGGA CGAACTGTGT TGGCAGGCCG CCGAGGCCGT GCAGCAGGGC
TTCACCATCC TGGTGCTCTC GGATCGGGAA GCAGGTCCGG GACGGGCACC CATTCCGGCC
GCGCTGGCCG TAGGAGCCGT GCATCACCAC TTGATCCGCA CGGGGTTGCG GGCCCGCTGC
AGCCTGGTGG TCGATAGCGG CGAGCCGCGC CAGGTGCACC ACCTCTGCGT GCTGGTCGGC
TATGGTGCCG ACGCCGTGTG TCCCTATCTG GCCCTGGAAA CCGTGGCCGA CCTGGTGCGC
ATGGGCGAGA TCACCGGGTT GCACGTCCAG GAAGCCCAGC AGCGCTACAT CAAGGCGCTC
TGCAAGGGGC TGCTCAAGGT GATGTCGAAG ATGGGCATTT CGGTATTTCA GAGCTACCGG
GGCGCCCAGA TCTTCGAAAT CGTGGGCCTG AGCGAGGAGG TGGTCGAGCG CTGCTTTGCC
CGGACCGTTT CCCGGCTGGG CGGTGTGGGC TTCGACGTGC TGGCCGAGGA GGTGCGCCTG
CGCTACGAGC AGGCCTATCC GGAGGTGCCG GTTGCCGGCG CACCGAAGGA CGAGCTGGAG
CGCGGCGGTT TCTACCAGTG GCGGCGCGGC GGCGAGCATC ACCGCTACAA CCCGCTGACG
GTGGCCAAAC TGCAGCACGC CGTCCGCGAA CGCGATCCGA AAGACTATGA GGAATTCGCC
CGCCTGGTCA ACGACGAGAG TCGGCGGCTG TGCAAACTGC GTGGCCTGCT GGACTTCGTC
CCGGCCGAGC GCCCGATCCC GCTCGAAGAG GTCGAGCCCT GGACGTCCAT CGTGCGCCGC
TTCAAGACGG GCGCCATGTC CTTCGGCTCG ATCAGCAGGG AAGCGCACGA GGTGCTGGCC
GAGGCAATGA ACCGCATCGG GGGGAAGAGC AACACGGGCG AAGGCGGCGA AGAACCGGAG
CGTTACGCCC GGGACAACCC GAAACGAAGC GCCATCAAGC AGGTGGCCTC CGGACGCTTC
GGCGTAACGA TCGGTTATCT GGCCAGCGCC GACGAAATCC AGATCAAGAT GGCCCAGGGG
GCCAAGCCGG GCGAGGGCGG ACAGCTCCCG GGCGAGAAGG TCTATCCCTG GATCGCCCGC
GTGCGGCATT CGACCCCGTG GGTAGGCCTG ATCTCGCCGC CACCGCATCA CGACATCTAC
TCGATCGAAG ACCTGGCCCA GCTCATCTAT GACCTCAAGC AGGCCAATCC CACTGCCCGT
ATCAGCGTGA AGCTGGTGGC CGAGGCGGGC GTGGGCACCA TTGCAGCGGG CGTGGCGAAG
GGCGGGGCCG ACGTCATCCT GATCAGCGGA CATGACGGCG GCACCGGCGC CTCGCCGATC
ACCTCGATCC TGCACGCCGG TCTGCCCTGG GAGCTGGGGC TGAGCGAGAC ACATCAGGCG
CTGGTGGCCA ACGGCCTGCG TGAGCGGGTC GTCGTGGAGG TGGACGGTCA GCTTCAGACC
GGACGCGACG TGGCCATCGC GGCCCTGCTG GGCGCCCAGG AGTTTGGCTT CGCTACGGCC
CCCCTGGTGG CGATAGGGTG CATCCGCATG CGCAAATGCC ACCTGAACAC GTGCCCGGTG
GGCATCGCCA CCCAGGATCC GGAGCTGCGC AAGAAGTTCA CGGGCCAGCC GGAGCACGTG
ATCAACTACT TCTATTTCGT GGCCGAAGAG CTGCGCCAGA TCATGGCGCA ACTGGGCTTC
CGGACGGTCG AGGAAATGGT CGGGCGCGTC GATCGGCTGC GCATCCGGTC GACCGACCAC
TGGAAGGCCC GCTACCTGGA TCTGCGGCCG CTGATCAAAA AAGTCGAAAC ACCGGAGATT
CTGCGGCCCT TCAGCCAGAA GCCGCCCGCG CGCCGCGACG TGCCCACGCT CGACGAGCGT
GTCCTGCCAC GCCTGAAGCC TGCGCTGGAG CGCCGCGAGC CGGTGCGGCT GCACGTGGCC
ATCCGCAACA CGGACCGCAC CGTCGGTGCC CGCATCAGCT ACGAAATTGC CACGCGCTAC
GGGGAAAGCG GCCTTCCGGA AGACACGATC TGGCTCGACT GCGAAGGCTC GGCCGGACAG
AGCTTCGGGG CGTTCCTGGC GCCGGGCGTG ACGCTGCGGG TCATCGGCGA GGCCAACGAC
TACTTCGGCA AAGGCCTCTC CGGCGGTAAG CTCATCATTC ATCCGCCGGA AAACGCCGCC
TATCCGGCCG AGTCGAACAT CATCATCGGC AACGTGGCAC TCTACGGGGC CACTTCCGGC
GAGGCTTACA TCCGCGGCCG GGCCGGCGAG CGCTTCGCCG TGCGCAACAG CGGCGCCCGG
GCCGTGGTCG AGGGTGTGGG CGACCATGGC TGCGAGTACA TGACCGGCGG GCGCGTGGTG
GTGCTGGGCC CCACGGGTCG CAACTTCGCG GCCGGCATGA GCGGCGGCAT CGCCTACGTG
CTGGACGTGG ACGGCCTGTT CGCCGAGCGC CACTGCAACC TGGACATGGT CGAGCTGATG
CCGGTGGTCG AGGAGGCGGA CATTGCCGAG CTGCGCGAGC TGATCGAACG CCATTACGCC
TACACGGGCA GCCCGGTGGC CCGCTGGGTG CTGGAAGACT GGCCGAACAT CCTGGCCCGC
TTCGTGAAGG TCTTCCCGAT CGACTACCGG AAGGCGCTCG AGCGGCTGGC CCGGGAGCAG
GAAGAAGCGA ACCTGCGGCA ACATCTGGCC GCCTGA
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| Protein sequence | MRLQNQNPDS HHRSLFSAQE QDACGVGLIC TLTDAPSHTI VQDGLQVLLR LSHRGACGCD
ERTGDGAGIL VQLPDLFLRE VALEEGVRLP EPGAYAVGML FLPKDRARQQ AGREAFEGLV
QAEGQQVLGW RRVPTRPEVL GVSAAAVEPA VWQVFVQAGP GLDVEAFERK LFVIKRRARH
VIDDPDFYVV SLSARTLVYK GMLMPDQLGV YYPDLTDPRF ASRLALVHSR FSTNTWPRWP
LAQPFHLLAH NGEINTLRGN INALRAREAL LRSELLGDDL AKVLPLLDES GSDSQMLDAM
IELLYRAGRS LPHAILMTIP EAWAHDDYMD DARKAFYEYH ACLMEPWDGP AAVCFTDGRY
AGAVLDRNGL RPARYTITRD GLVVLASEVG VLDLEPERVV EKGRLQPGRM FLVDLEEGRV
VRDEEIKATL SRRRPYRLWL RSHLRTEADL PRAQALPRTS DLESLRRQQR LFGYSLEELR
MILAPMAQKK DDPVGSMGDD TPLAVLSDFP RLTYDYFKQL FAQVTNPPID AIREELVTSL
HTYLGGEANL LDETPEQAHR LRLEHPVLTP EKLARIKALD EENLRATTLS TTFDVKAGGE
GLVAALDELC WQAAEAVQQG FTILVLSDRE AGPGRAPIPA ALAVGAVHHH LIRTGLRARC
SLVVDSGEPR QVHHLCVLVG YGADAVCPYL ALETVADLVR MGEITGLHVQ EAQQRYIKAL
CKGLLKVMSK MGISVFQSYR GAQIFEIVGL SEEVVERCFA RTVSRLGGVG FDVLAEEVRL
RYEQAYPEVP VAGAPKDELE RGGFYQWRRG GEHHRYNPLT VAKLQHAVRE RDPKDYEEFA
RLVNDESRRL CKLRGLLDFV PAERPIPLEE VEPWTSIVRR FKTGAMSFGS ISREAHEVLA
EAMNRIGGKS NTGEGGEEPE RYARDNPKRS AIKQVASGRF GVTIGYLASA DEIQIKMAQG
AKPGEGGQLP GEKVYPWIAR VRHSTPWVGL ISPPPHHDIY SIEDLAQLIY DLKQANPTAR
ISVKLVAEAG VGTIAAGVAK GGADVILISG HDGGTGASPI TSILHAGLPW ELGLSETHQA
LVANGLRERV VVEVDGQLQT GRDVAIAALL GAQEFGFATA PLVAIGCIRM RKCHLNTCPV
GIATQDPELR KKFTGQPEHV INYFYFVAEE LRQIMAQLGF RTVEEMVGRV DRLRIRSTDH
WKARYLDLRP LIKKVETPEI LRPFSQKPPA RRDVPTLDER VLPRLKPALE RREPVRLHVA
IRNTDRTVGA RISYEIATRY GESGLPEDTI WLDCEGSAGQ SFGAFLAPGV TLRVIGEAND
YFGKGLSGGK LIIHPPENAA YPAESNIIIG NVALYGATSG EAYIRGRAGE RFAVRNSGAR
AVVEGVGDHG CEYMTGGRVV VLGPTGRNFA AGMSGGIAYV LDVDGLFAER HCNLDMVELM
PVVEEADIAE LRELIERHYA YTGSPVARWV LEDWPNILAR FVKVFPIDYR KALERLAREQ
EEANLRQHLA A
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