Gene Rmar_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1214 
Symbol 
ID8567861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1421029 
End bp1422348 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content68% 
IMG OID 
ProductUDP-N-acetylglucosamine1- carboxyvinyltransferase 
Protein accessionYP_003290492 
Protein GI268316773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC TGGTCATCGA AGGCGGCCGT CCGCTCCGGG GCACGATCCC GATCAGCGGC 
TCGAAGAACA CGGCGCTGAT GCTGATGGCC GGGGCCGTGC TGGCCGACGG CGTCACCGTG
CTGGAAAACA TTCCGCACCT GCGCGACATC ACGACGTTCT CGCATGTGCT GCGCATTGCA
GGGGCTTCGG TGCGGTTCGA TCCGGAAACG CACGTCATGC GCATCGATGC CACCCGTATC
GACTTTCCCG AGGCCCCTTA CGAGCTGGTC AAGCAGATGC GGGCGTCGTT CTACATGCTG
GGTGCCCTGC TGGGCCGCTG CGGACAGGCG CGCGTGTCGC TCCCAGGCGG CTGCGCCTGG
GGTCCGCGCC CGGTCAACCT GCACCTGGAG GGACTGCGCG CCTTCGGGGC CGAGATCGAG
CTGGACCAGG GCTACGTAGT GGCCCGCGCG CCCGGCGGAC GACTGCGCGG CGGCCGTTTT
CGGCTCGAGC CGCCCAGCGT CGGGGCCACG GTCAACCTGC TGCTGGGAGC CGTCACGGCC
CGCGGCAGCT CCCGCATCGA GAACGCCGCG CTCGAACCCG ACGTGGTCGT CTTCGGCCGA
GCCCTGCAAC AGATGGGCGC CCGCATCGAA GGACTGGGCA CGCGCACCAT CGAAGTGGAA
GGCGTCGACG CGCTGCAGCC CGTCACCTTC CGCAACTGCC CCGACCGCAT CGAGCTGGGC
ACGTTCATGA TTGCCGCCGC CATCGCAGGA TCGCCCGGCG ACACGATCTA CCTGACCGGC
GCCGAGCCGT CCCACCTGGG CGAGGCGTTT CTGGAGGCCT TTCGCCAGAC CGGCGCCGCC
TTCACCTTCG ATGGCGACAC GGTGGCCGTC ACCGTCCCCG AACGGCTGCA GGCCGTTTCG
ATCGAGACGG CACCCTATCC GGGCTTCCCG ACCGATCTGC AGGCGCAGTG GACCGTTCTG
CTCTCCCAGG CCGAAGGCGC CGGCTTCGTG CGGGATACGG TCTATCCTGA TCGCTTCAAG
CACGTCCCCG AACTCATGCG CATGGGGCTG CAGGCGCGCG TCGAGGGCAA CACGGTCTTT
CTGGAAGGGC CGCAGCGTCT GCAGGGTGCG CACGTGATGA GCACCGACCT GCGCGGCAGC
GTTTCACTGG TGCTGGCGGG TCTGGTGGCC GAAGGCGAAA CGCACGTGCT GCGCGTCTAC
CACCTCGACC GCGGCTACGA AAACCTCGAA GGCAAGCTCT CGGCCGCCGG CATTGCCATC
CGTCGCGAAA GCTACGACGA ATTCGCCACC CCCACTCCCG AATCGGCCGA GGAAAACTGA
 
Protein sequence
MDKLVIEGGR PLRGTIPISG SKNTALMLMA GAVLADGVTV LENIPHLRDI TTFSHVLRIA 
GASVRFDPET HVMRIDATRI DFPEAPYELV KQMRASFYML GALLGRCGQA RVSLPGGCAW
GPRPVNLHLE GLRAFGAEIE LDQGYVVARA PGGRLRGGRF RLEPPSVGAT VNLLLGAVTA
RGSSRIENAA LEPDVVVFGR ALQQMGARIE GLGTRTIEVE GVDALQPVTF RNCPDRIELG
TFMIAAAIAG SPGDTIYLTG AEPSHLGEAF LEAFRQTGAA FTFDGDTVAV TVPERLQAVS
IETAPYPGFP TDLQAQWTVL LSQAEGAGFV RDTVYPDRFK HVPELMRMGL QARVEGNTVF
LEGPQRLQGA HVMSTDLRGS VSLVLAGLVA EGETHVLRVY HLDRGYENLE GKLSAAGIAI
RRESYDEFAT PTPESAEEN