| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1208 |
|---|
| Symbol | |
|---|
| ID | 8567855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1416596 |
|---|
| End bp | 1417663 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | nitrite reductase, copper-containing |
|---|
| Protein accession | YP_003290486 |
|---|
| Protein GI | 268316767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.400053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA GCTCGCGTCG TGACTTTCTG AAAGGCCTGG GCGTGGCCGC CGCCGGTGGA
CTGATCACTT CGTCGGGTCT TTCGCTGGAA GCCGAGGGCC GCGGTCGTTC CGGCCGGATT
GTTACGGGGC CCATGGGGCG TCGCGTCGAG CGCGTGGCCG CCGATCCCGC CGACATTCCG
CCGCCGATCC ATCGGGACTG GCCCATCACG CACGACATCA CGCTGCGCGT CGAGGAGGTC
GTGGCTGAAA TCGAACCGGG CGTGACCTTC AACTTCATGA CCTATAACGG GCAGATTCCC
GGCCCCATGA TCCGCGTGCG GCGGGGCGAC GTGGTCAACC TGACCATCGA GAATCCGTCG
TCGAACCGCA TGCCGCACAA CGTGGACTTC CATGCCGTCT ATGGTCCGGG CGGTGGCGCC
GCCCATACGC TGGTGGCGCC CGGTCAGTCG AAGACGATTC GCTTCCGGTG CCTGTATCCG
GGCGCATACG TTTACCACTG CGCCGTGCCC GACATGGACT ATCACATCTC CAGTGGCATG
TTCGGGATGA TTCTCGTCGA GCCGCCGGAG GGGCTGCCGC CGGTGGACCG GGAGTTCTAC
CTGGGTCAGC ATGAGCTCTA CACCGACAAG CAGCCGGGCG AGCCGGGCCA TCACAACTTT
GACTTCGAGA AACTCTTCGA AGAAAAACCC ACCTACGTGC TCTTCAACGG TGCCAAGTAC
GGCCTGACGG CCGATCGCTA CGGCGCCATG AAGGCGAAGG TGGGCGAGAC GGTCCGGATC
TTCCTGGCGG TCGGTGGTCC GAACCTGACG AGCAACTTCC ACCCGATCGG CAACGTGCTT
TCCTACGTCT GGCGCGAAGG GGCCATTCTG AACAACCCCG AACGGAACGC GCAGACCGTG
GCCATCCCGC CGGGCAGCTG CGGCATCTTC CACATGCGGC TGCCGGTGCC CGGCCCGGTC
AAGTTCGTCG ACCATGCGCT TACGCGCGTG GCGCGCAAGG GCCTGCTGGC CGTGCTGGAA
GTGGAAGGCC CCGAGCAGCC GGACATCTAC AACCCCAACC CTGCCTGA
|
|---|
| Protein sequence | MKASSRRDFL KGLGVAAAGG LITSSGLSLE AEGRGRSGRI VTGPMGRRVE RVAADPADIP
PPIHRDWPIT HDITLRVEEV VAEIEPGVTF NFMTYNGQIP GPMIRVRRGD VVNLTIENPS
SNRMPHNVDF HAVYGPGGGA AHTLVAPGQS KTIRFRCLYP GAYVYHCAVP DMDYHISSGM
FGMILVEPPE GLPPVDREFY LGQHELYTDK QPGEPGHHNF DFEKLFEEKP TYVLFNGAKY
GLTADRYGAM KAKVGETVRI FLAVGGPNLT SNFHPIGNVL SYVWREGAIL NNPERNAQTV
AIPPGSCGIF HMRLPVPGPV KFVDHALTRV ARKGLLAVLE VEGPEQPDIY NPNPA
|
|---|
| |