Gene Rmar_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1187 
Symbol 
ID8567834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1389535 
End bp1390596 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content69% 
IMG OID 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_003290465 
Protein GI268316746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATT TCCCCCCGCT TCAGAACGAT CTGTTGCTCC GGGCGGCGCG GCGCGAGCCG 
GTCGAGCGCA CGCCCGTCTG GATCATGCGG CAGGCCGGCC GCTATCTTCC TGAATATCGG
GCGCTTCGGG CCGACGAGGC CTTTTTCGAC GTGGTGCGCA CGCCGGAGCT GGCCACCGAG
GTGACGCTGC AGCCGCTGCG GCGCTTTCCG CTCGATGCGG CCATTATTTT TTCCGACATC
CTGGTGGTGC CGCAGGCGCT GGGGCTGCGC GTGGAGATGA TCCCGGGCCG CGGGCCGTAC
TTTCCCGATC CGCTGCGCAC GGTTGAAGAC CTGCGGCGGC TCCGGCGGCC GGATGTGCGC
GAGGCGCTGC GCTACATGCT GGAAGCGATC ACGATGACGC GGAAGGCCCT GGCCGGTCGC
GTGCCGCTCA TCGGCTTCTG CGGAGCGCCC TGGACGCTCA TGGCCTACAT GGTGGAGGGC
GGAGGCAGCA AGACGTTCGC CCGCGCCAAG GGCTGGCTCT ACCGGCAGCC CGAGGCCAGC
CACCGACTGC TTTCGCTGCT GACCGACGTG CTCGTGGAGT TTCTGATCGC ACAGATCGAC
GCGGGCGCAC AGGTGGTGCA GGTGTTCGAT TCCTGGGCCG GCGTGTTGAG CCCGGACCTG
TTTCGCACCT TTGCGCTTCC GTACCTGCGC CGCATCGGCG AGGAGGTCGG GAAGGCCCGG
CCCGAGGTAC CGCGCATCGT GTTCGCCCGG GGTGCCCATG CATCGCTGGC CGAACTGGCC
GAGGCAGGTT ACGACGTGGT GGGGCTCGAC TGGACGATCG ACCCGCGCCA GGCCCGAGAG
CTGACGGGCG GGCGCGTGGC CCTGCAGGGC AACCTGGATC CCTGTGCGCT GTACGCCGAG
CCCGAAACGA TCCGCCGGCT GACGCACCGG ATGCTCGAAG CCTTCGGACC GCGCGGGCAC
ATCGCCAACC TGGGGCACGG CCTGCACCCC GACCACAACC CCGATCACGT GCGCGCCTTC
GTGGAAGCCG TGCACGACTA CGTACCGGTG GCTTCGGAAT GA
 
Protein sequence
MTDFPPLQND LLLRAARREP VERTPVWIMR QAGRYLPEYR ALRADEAFFD VVRTPELATE 
VTLQPLRRFP LDAAIIFSDI LVVPQALGLR VEMIPGRGPY FPDPLRTVED LRRLRRPDVR
EALRYMLEAI TMTRKALAGR VPLIGFCGAP WTLMAYMVEG GGSKTFARAK GWLYRQPEAS
HRLLSLLTDV LVEFLIAQID AGAQVVQVFD SWAGVLSPDL FRTFALPYLR RIGEEVGKAR
PEVPRIVFAR GAHASLAELA EAGYDVVGLD WTIDPRQARE LTGGRVALQG NLDPCALYAE
PETIRRLTHR MLEAFGPRGH IANLGHGLHP DHNPDHVRAF VEAVHDYVPV ASE