Gene Rmar_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1174 
Symbol 
ID8567820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1370025 
End bp1372001 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003290452 
Protein GI268316733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTGC TTGGCATCCT GCTACTCGTT GCGACGCCGG CATTTGCCCG GCAGGTCGTG 
CCGGACACGC TCCCTCCGGC CTCGCCCATC GAAGCGTCGC TGGAAGGATT GACGCTCGAT
CCGGAGGCGC TGGAGGAGCT GGCCGCCTGG CTGGACGAGC GGCTGCAGGA TCCGCTGGAC
CTGAACACGG CCCCGGTGGG TGAGCTGGCC CGCCTCCCCG GCCTCTCGCC GCTGCTGGCG
CGGCGGATCG CTGCCTACCG CCGACATCGG CCGCTGACCG AGGTGGACGA GCTGCTGCGC
GTGGAGGGCT TCACGCCGGA GCTGCTGGCT CGCATCCGGC CGTTCGTGAC CGTCCGTCCG
GTCCGAAGCC CCGTTCGCCC TTCAGGCTAC ATGCTGCAGC GGGTCGACTA CTTTCCGGAA
CAGGCCGACG CACGCTACCC CGGTCCCCCG CTCCGGCTCC AGACACGCCT GCGGCTGCGC
TACGGCCGGC TCGAAGCAGC CCTCACGCTC GAAAGTGACC CGGGTGAACC ATTTCGCTGG
GATCCGGCCA CGCACACCTA CGGGTTCGAT CATCAGGCCG GCTTTGTGGC CTGGCGTGGT
TCGGGATGGT TGCAGCAGCT CATCGTGGGC GACTTCAGCG CCCGCTTCGG CGCCGGCCTG
ACGCTCTGGT CCATGCCCGC CATCGACAGC TACCATGCGG CGGCCGACGC ACCGCTGCGG
CAGGGATCGG GGCTGATGCC CTACAGCGGC ACCGACGAGG TGCGTTACTT CCGCGGCCTG
GCACTGACGC TGGCCCCCGC ACCGGCCCTG CGCCTTGCCC TGTTCGGCTC GCGGCGGTGG
CTGGACGCCC GCCTCGACAC GCTCGAGGCC ACGCTGCAGG CCGGCGTCGT CAGCCTGCCC
GCTTCGGGGC TGCACCGAAC CGAGGCAGAG CGCAGCCGCA AAGGTGTGCT GCGCAGCGAC
GTGCTGGGCG GTGCGTTGTC CTTCGAGCAT GCCCGCGGCC AGCTGGGCCT GGTCGGCTAC
ACGACCCGCT TCGGCCATCC GCTGCAGCCC GGAGATGCCC TCTACAACCG GCACGCCTGG
CGCGGCCGAA CGGCCTGCGC CCTGGGCGTT TTCGGGCAGC TTTTGCTCGG CCGGGCGCTG
CTGAGCGCCG AAGTTGGCGG CACGCTCGGC CGTCCCTTCG GTCTGGTGGC GGCGCTGTCG
GGGCCAGTGG GCCGCTTTGC CCGGGCTACG CTGGCCGTGC GTCACCTGCC CACTCGCTTC
GTCAGCCTGC ACGGCGATCC GTTCGACACC CGGAGCGGCA CGCCTACCGG CGAAACGGGC
GGTTACGTCG GTCTGGAGCT CACGCCAGCG CCGGACTGGC AACTGCTGGC CGCGGTCGAT
CAGTACCGGC TCCCCTGGCC CCGCTACGGA CAGTTCTGGC CCACCACCGG CCGCACGCAC
TGGCTTCGGC TCACCATGCG CCCGCGTCCC TGGCTGGAGA CCTACCTGCA GGTCCGGCAC
GATCGCGCCG AACAACGTAC GGAAGCACCC GGTCCCGGCG CTGCCCTGCT CGAAGCCACC
GCGCCCGAGC GTTACCTGTC CCTCCGCTGG CACGGCACCT ACGCCTTCAG TTCCACGCTG
CGCCTGGAGG CCCGTCTGGA GCACGCCCGC CGCACGCGAT CCGGCCAACG CGGCACCGGC
TGGTTGTTCT ACCAGGGCGT GCGCTGGCTG CCCCGCCCCT GGCTGCAGCT CGACGCTCGC
GTGACCTTCT TCGACAGCGA CACGGCTTTG CTGCTCTACG CGCCCGAGCC CGGTCTGCGC
TACAGCATGG CGCTGGCGGC GCTGAGCGAC CGGGGTCAGC GCACGCTGCT GCGCCTGCAA
CTGCGTCCCT TGTCGCAACT GCTGCTGCAG CTACGGTACA CCACCACGCT GGAGGAAACA
CCGACACGGA ACATCCGGTG CACCTGGCAA TTTCTGCTGC TGTGGCAGAT GGGTTAA
 
Protein sequence
MRLLGILLLV ATPAFARQVV PDTLPPASPI EASLEGLTLD PEALEELAAW LDERLQDPLD 
LNTAPVGELA RLPGLSPLLA RRIAAYRRHR PLTEVDELLR VEGFTPELLA RIRPFVTVRP
VRSPVRPSGY MLQRVDYFPE QADARYPGPP LRLQTRLRLR YGRLEAALTL ESDPGEPFRW
DPATHTYGFD HQAGFVAWRG SGWLQQLIVG DFSARFGAGL TLWSMPAIDS YHAAADAPLR
QGSGLMPYSG TDEVRYFRGL ALTLAPAPAL RLALFGSRRW LDARLDTLEA TLQAGVVSLP
ASGLHRTEAE RSRKGVLRSD VLGGALSFEH ARGQLGLVGY TTRFGHPLQP GDALYNRHAW
RGRTACALGV FGQLLLGRAL LSAEVGGTLG RPFGLVAALS GPVGRFARAT LAVRHLPTRF
VSLHGDPFDT RSGTPTGETG GYVGLELTPA PDWQLLAAVD QYRLPWPRYG QFWPTTGRTH
WLRLTMRPRP WLETYLQVRH DRAEQRTEAP GPGAALLEAT APERYLSLRW HGTYAFSSTL
RLEARLEHAR RTRSGQRGTG WLFYQGVRWL PRPWLQLDAR VTFFDSDTAL LLYAPEPGLR
YSMALAALSD RGQRTLLRLQ LRPLSQLLLQ LRYTTTLEET PTRNIRCTWQ FLLLWQMG