| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1126 |
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| Symbol | |
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| ID | 8567772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1302944 |
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| End bp | 1305316 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | capsular exopolysaccharide family |
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| Protein accession | YP_003290405 |
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| Protein GI | 268316686 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0796389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACATT ACCGACATCA TTCGCTGATC GTGGCGCGTG GCGGGCAACG GGGGGGATTG
CCGCCCGCCT CCGACGAGAA GCGCGACGAA GGCCGCATCA ACTTTGCCGA GATCTGGCAC
ACGATCCGGC GGGGCAAGTG GATCATCCTG CTGACCATGC TGGTGGTGGC CGGCGCTATC
GGCGCATACA CTTACACGCT GCCGCCCGTG TACGAGTCGA GCGCGATCGT CTTTGTCGAT
ACGCGGGGCG GTGGGAATGC GCCGGTCAGT GTGGCGGCCT TTACGCCCAT CGAGCGGCGG
GCGCTCTCGA ACGAGCTGGG CATTCTGCGT AATTCGGCCG AGCTGGCCAC GCGCGTGGCC
GAGGCGATCG TGGCCACGGC GGAAACGGCA GGGGCAAAGG ATCGCTTTCC GATCCTGGCG
CCTGCCGAGG ATGGGCGGGA GCCGTCTATC CGGGAGATCG CCTTTCGGCT GCGTGAGCGG
GTTCGGTTCA GTCCACTTTC GGATCAGGAC ATGATCGTGA TCACGGCCGA GAGCACGACG
CCCGAAGAGG CGGCTGTGAT CGCCAACCGC TATGCCGAGG AATACGAGCG CTTCAGTCGG
GAGCGCAGCC GGGAAAGCCT GGCGGCCGCC CGCGAGTTTG TCGAAAAACA GGTCGAGCAG
CGGCGCCAGG AGCTGGAGGA GCTGGAGCGA CAGTGGGAGG CGTTTGCGCG TTCGCGCCAG
GTGGTGCGGC TGGGACCGCA GGGCGAACGT CTGGTCGCCG AGGTGGCACA GCTCGAAGCG
CAGCGCGACG CCGCCCGCTT CCAGCTGGAG CAGGAGAAGT CGGCGCTGCA GTTCATCGAA
CAGGAACTGC AGAAGCTGGA GCCGGGTCTG GTCGACGAGC TGGTCAAGAG CCGGCAGGTC
TCGACGCTGG AGGCGCAGAT CGACGCGCTT TCCAAAAAGA TCGCCGAGCT GAAGGTACAG
GCCGAGCAGT ACTACGTGTT CAATCCGAAG CTGCGCGGCA ACGAGGAAAA GCTGGGTGAT
CAGCAGCTTG TCGAGATCGT GCGGCAGATC GATCATTTCG AAAAGCAGCG CGAGCAGCTG
CAGGCCCAGC TCGTCAAAGA GATGATCGGC CGCGACAGCC AGGCACCGGC TTCGGAACCG
CTGAGCTACG TCGAGCAGCT CCGGGCCCGC CGCATCGAAA AGCAACTGGC CATCCAGGAG
CTGGAGCGCC AGGTCGAAGC GTTCAACCAG GAGCTGGCCA AGTACGAGGG TCAACTGGCC
CGCCTGCCGC GGCAGCAGAT CGAACTGGAG CAGCTCGAGC GGCGCCGGGC CTTGGCCGAG
CAGTGGTACA CGACCTTCGT GCAGGAGCTG CAGCGCATCA TGATCGCCGA GCAGTCCGAG
CTCGGCTACG TCAAGATCGT CAGCAGTGCG TTTGTCCCGA CCGTGCCGGT GCGGCCGAAT
CGGGCGCAGA ACATTGTGCT GGGCATCCTG ATCGGCCTGG GGCTCGGGCT CGGACTGGCG
TTTCTGCGAC AGGCCATGCA CACGCAGCTT GACGATCCCG AGAAGGTCCG GGAGCACGGC
TACACGTTGC TGGGCGTGGT GCCGGCCATG GAGCCGTACA TTCGCAAGCA TTTCCGCGGG
CGGAAGGTGG TCGAGGTGGA CGAGCGGCCG CGCAGCACCA CGTTGATCAC GCTGCTGGAT
CCCTGGTCGC CGATCGCCGA GAACTTCCGG CTCATTCGTA CGAACCTGCA GCAGCACACC
CCGGCGAAAG GACGTGCCGT AACCTGGCTG GTGACCAGCC CGGAGATGGG CGACGGCAAG
ACGGTGGTGG CAGCCAACCT GGCCGTGGCG ACGGCCCATG GCGGTCAGCG CACGCTGCTG
ATCGATGCCG ACCTGCGGCG CCCGCGTGCG CACGAGGTGC TGGGGATGGC CGACCAGCCC
GGTCTGGCCG AACTGCTGCT GGGCAAAATA CGGCCCGAGC CGGAAAGCTG GGCGACCGAC
ATCCCCAACC TGTACTTTCT CCCGGCCGGC GTGGTCGATC AACCACCGCC CGAGTTGCTG
GGATCGCAGC GCATGGTGCA GGTGCTGGAT TTTCTTCGCA AGCACTTTGA CGTGATCGTG
ATCGACTCGC CGCCGGTGCT GGCCGTGACC GACGCGGTCC TGCTGGCGCA GCGTTGCGAG
GCAACGCTGA TGGTGGTCTC GGCCGGACGC ACCGATGCGA AAGCGCTGGA TATTGCCCGG
CAGACGCTGG AGTCGGTGAA CGTATCCATT GCCGGCGTGG TCTTCAACCG CTACCGGGCC
GACAAGCGCA AAGGCTATGC TTATGGGTAC GGCTACGGCC GCCGATACCA TAAAGGCTAC
GGCTACTATG CCCGGGAAGC CGCGGCCGGA TGA
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| Protein sequence | MAHYRHHSLI VARGGQRGGL PPASDEKRDE GRINFAEIWH TIRRGKWIIL LTMLVVAGAI
GAYTYTLPPV YESSAIVFVD TRGGGNAPVS VAAFTPIERR ALSNELGILR NSAELATRVA
EAIVATAETA GAKDRFPILA PAEDGREPSI REIAFRLRER VRFSPLSDQD MIVITAESTT
PEEAAVIANR YAEEYERFSR ERSRESLAAA REFVEKQVEQ RRQELEELER QWEAFARSRQ
VVRLGPQGER LVAEVAQLEA QRDAARFQLE QEKSALQFIE QELQKLEPGL VDELVKSRQV
STLEAQIDAL SKKIAELKVQ AEQYYVFNPK LRGNEEKLGD QQLVEIVRQI DHFEKQREQL
QAQLVKEMIG RDSQAPASEP LSYVEQLRAR RIEKQLAIQE LERQVEAFNQ ELAKYEGQLA
RLPRQQIELE QLERRRALAE QWYTTFVQEL QRIMIAEQSE LGYVKIVSSA FVPTVPVRPN
RAQNIVLGIL IGLGLGLGLA FLRQAMHTQL DDPEKVREHG YTLLGVVPAM EPYIRKHFRG
RKVVEVDERP RSTTLITLLD PWSPIAENFR LIRTNLQQHT PAKGRAVTWL VTSPEMGDGK
TVVAANLAVA TAHGGQRTLL IDADLRRPRA HEVLGMADQP GLAELLLGKI RPEPESWATD
IPNLYFLPAG VVDQPPPELL GSQRMVQVLD FLRKHFDVIV IDSPPVLAVT DAVLLAQRCE
ATLMVVSAGR TDAKALDIAR QTLESVNVSI AGVVFNRYRA DKRKGYAYGY GYGRRYHKGY
GYYAREAAAG
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