Gene Rmar_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1121 
Symbol 
ID8567767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1296214 
End bp1298199 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content64% 
IMG OID 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003290400 
Protein GI268316681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCCGC GTGTATCTTT TCGTACATTA TTTGCAGGGG GAGGGCAGAG CCTTTCGGTC 
CCCGCCATGC TGGATGACGA AACCATTCCC ATGAAAGAGG AAGCGCCGGT TTCGAAAGAA
CAGCGGCGTG CCCGGGTGGA GCATGCCATC GTGGAGGCGG CCCGGCTGCT GGTGGCTCCG
GATCCGCTCG ACATGGAGGC CCTGCTGCGG ATTCTGGGCG AGGCGACCGA CGCGGCATCG
GTCTACTTCG TGGGCGTGCC GCAATCGGGG GAGGCGCAGG ATTATTCCTA TACCGTCTGG
CATCGACAGC AGCCGAAGAC ACCGCACTGG TGGCAGGAGC TGGAAGCGCG GCTCCGGAAA
TACTTTCCGA CGCCAGCCAC GCAGGACGAA GTGCATCAGC TTGGCGAAAA CCTGCTGGTG
GTGCCGGTAC TCTCGGCCGA AGATGAATTT TACGGCTATC TGGGACTGGA ATTCGCCGAC
GGACTATCGG AGGCGCGTCA GGAGGAGGCC CGGCTGCTGG AAGTGCTGGG AGGCCTGCTG
GCCACTTACT TCGATCGCAG GGCTACCGAA GTGGCCCGTC GAGAAAGTGA AGAACGGTGG
CGGCGGCTGG TAGAGCAGCT GCCCGAGCCG ATCCTGCTGG TGGCCCGTGA CGCGCTGGTT
TATCTCAACC CGGCCGGACG GCGGCTGCTG GGGGCCGAGG CCGAGGAAGA TCTGACCGGA
CGTTCACTCC TGGATTTTTT CTCGGCGGAT CAGTACGACG AGGTCGCCCG CCAGCTTCGA
CGCCTGGAGG CGGGCGAGGC GGTGCCGCCT TTTGAGGGCT CGTTAATTCG TTTTGACGGT
GAGGAGCGGA TCGTTGAGAT CACGGCGGCA CGGGTGCTCT TCCAGGGCCA TCCCGTGGTC
CAGCTCATTC TGCGCGACCT GACCGAGCGG CGGCGGGCCG AAGAGCGTTA CCGGGCTTTT
GTCAGCACGA TCACCGAGGG CATCTTTCGG ATTGAGTTGC GGCAGCCGGT GGCCACGACC
ACGCTGCCGG ATTTGCAGGT GGAGCACCTC TATCAGCATG GCTATCTGGC CGAATGCAAT
GCGGTGATGG CGCGCTGGCT GGGGGCTGAG CGCCCCGAGG AGGTGGCCGG TCGTCCGCTT
TCATCGCTCC GGCACTACTT CCGTCCGCGT TACCTGCGTG AGTTCGTGCA GCGGGGCTAT
CAGGTGCACG GCGAGGAATA TGCGCTGTCG GGCAAGCAGG GCATGCGTTA CTTCGTGGTC
AATGCCGTGG GGACGGTGGA GCGGGATCGG CTGGTGCGCG TCTGGGGCAG CGCCGTCGAA
GTGACGGAAC GGGTGGAACT GGAGCGCCGC ATGGTCCAGA CGCTGGAGGA GCAGCAGCAG
GCTATCGGGC GCGATCTGCA CGACGGCGTC GGGCAGTTGC TGACAAGCGT CCGTATGCTC
AGCGAGAACC TGGCCACGCG CCTGCAGGCC GAGCAGCACG AACTGGCCGA GCTGGCCCAG
AAGGTCGTGC GTTTCGCTCA GGAAGCCTCC GAGGGGGTGC GAACAATCTA CCGGGGGCTG
ACGCCGGCCC AGCTCTACAC GGAAGATCTG ACGCTGGCCC TGGAAGAACT GGCCTACAAC
ACGAACGCCC TGCCCGGAAT TCGCTGCCGG TTTGAAACGG ATGGGCAGGT GTCGATCGAC
AATCAGGAAG TCAAGCTGCA CCTGTACCGT ATTGCCCAGG AAGCCATCAA CAACGCGCTC
AAACATGCGC AGGCTTCGGA GATCGTGCTG ACACTGCGCC GTCGGGACGA TGTCATTGAA
CTCTGTGTGG CCGACAACGG CTGCGGCCTC GATCCGAGCC GGGCCCGCGC CGACTCGCTG
GGATTGAAAA CCATGTACTA CCGGGCGCGC ACGATCGGCG GTACGCTGCG CATTCATTCG
CGACCGGGCG AAGGGACCAC CATCTGCTGT CGCATCCCGG TGGGTGAAAT GCACGGAACT
ACCTGA
 
Protein sequence
MWPRVSFRTL FAGGGQSLSV PAMLDDETIP MKEEAPVSKE QRRARVEHAI VEAARLLVAP 
DPLDMEALLR ILGEATDAAS VYFVGVPQSG EAQDYSYTVW HRQQPKTPHW WQELEARLRK
YFPTPATQDE VHQLGENLLV VPVLSAEDEF YGYLGLEFAD GLSEARQEEA RLLEVLGGLL
ATYFDRRATE VARRESEERW RRLVEQLPEP ILLVARDALV YLNPAGRRLL GAEAEEDLTG
RSLLDFFSAD QYDEVARQLR RLEAGEAVPP FEGSLIRFDG EERIVEITAA RVLFQGHPVV
QLILRDLTER RRAEERYRAF VSTITEGIFR IELRQPVATT TLPDLQVEHL YQHGYLAECN
AVMARWLGAE RPEEVAGRPL SSLRHYFRPR YLREFVQRGY QVHGEEYALS GKQGMRYFVV
NAVGTVERDR LVRVWGSAVE VTERVELERR MVQTLEEQQQ AIGRDLHDGV GQLLTSVRML
SENLATRLQA EQHELAELAQ KVVRFAQEAS EGVRTIYRGL TPAQLYTEDL TLALEELAYN
TNALPGIRCR FETDGQVSID NQEVKLHLYR IAQEAINNAL KHAQASEIVL TLRRRDDVIE
LCVADNGCGL DPSRARADSL GLKTMYYRAR TIGGTLRIHS RPGEGTTICC RIPVGEMHGT
T