Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1121 |
Symbol | |
ID | 8567767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1296214 |
End bp | 1298199 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003290400 |
Protein GI | 268316681 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCCGC GTGTATCTTT TCGTACATTA TTTGCAGGGG GAGGGCAGAG CCTTTCGGTC CCCGCCATGC TGGATGACGA AACCATTCCC ATGAAAGAGG AAGCGCCGGT TTCGAAAGAA CAGCGGCGTG CCCGGGTGGA GCATGCCATC GTGGAGGCGG CCCGGCTGCT GGTGGCTCCG GATCCGCTCG ACATGGAGGC CCTGCTGCGG ATTCTGGGCG AGGCGACCGA CGCGGCATCG GTCTACTTCG TGGGCGTGCC GCAATCGGGG GAGGCGCAGG ATTATTCCTA TACCGTCTGG CATCGACAGC AGCCGAAGAC ACCGCACTGG TGGCAGGAGC TGGAAGCGCG GCTCCGGAAA TACTTTCCGA CGCCAGCCAC GCAGGACGAA GTGCATCAGC TTGGCGAAAA CCTGCTGGTG GTGCCGGTAC TCTCGGCCGA AGATGAATTT TACGGCTATC TGGGACTGGA ATTCGCCGAC GGACTATCGG AGGCGCGTCA GGAGGAGGCC CGGCTGCTGG AAGTGCTGGG AGGCCTGCTG GCCACTTACT TCGATCGCAG GGCTACCGAA GTGGCCCGTC GAGAAAGTGA AGAACGGTGG CGGCGGCTGG TAGAGCAGCT GCCCGAGCCG ATCCTGCTGG TGGCCCGTGA CGCGCTGGTT TATCTCAACC CGGCCGGACG GCGGCTGCTG GGGGCCGAGG CCGAGGAAGA TCTGACCGGA CGTTCACTCC TGGATTTTTT CTCGGCGGAT CAGTACGACG AGGTCGCCCG CCAGCTTCGA CGCCTGGAGG CGGGCGAGGC GGTGCCGCCT TTTGAGGGCT CGTTAATTCG TTTTGACGGT GAGGAGCGGA TCGTTGAGAT CACGGCGGCA CGGGTGCTCT TCCAGGGCCA TCCCGTGGTC CAGCTCATTC TGCGCGACCT GACCGAGCGG CGGCGGGCCG AAGAGCGTTA CCGGGCTTTT GTCAGCACGA TCACCGAGGG CATCTTTCGG ATTGAGTTGC GGCAGCCGGT GGCCACGACC ACGCTGCCGG ATTTGCAGGT GGAGCACCTC TATCAGCATG GCTATCTGGC CGAATGCAAT GCGGTGATGG CGCGCTGGCT GGGGGCTGAG CGCCCCGAGG AGGTGGCCGG TCGTCCGCTT TCATCGCTCC GGCACTACTT CCGTCCGCGT TACCTGCGTG AGTTCGTGCA GCGGGGCTAT CAGGTGCACG GCGAGGAATA TGCGCTGTCG GGCAAGCAGG GCATGCGTTA CTTCGTGGTC AATGCCGTGG GGACGGTGGA GCGGGATCGG CTGGTGCGCG TCTGGGGCAG CGCCGTCGAA GTGACGGAAC GGGTGGAACT GGAGCGCCGC ATGGTCCAGA CGCTGGAGGA GCAGCAGCAG GCTATCGGGC GCGATCTGCA CGACGGCGTC GGGCAGTTGC TGACAAGCGT CCGTATGCTC AGCGAGAACC TGGCCACGCG CCTGCAGGCC GAGCAGCACG AACTGGCCGA GCTGGCCCAG AAGGTCGTGC GTTTCGCTCA GGAAGCCTCC GAGGGGGTGC GAACAATCTA CCGGGGGCTG ACGCCGGCCC AGCTCTACAC GGAAGATCTG ACGCTGGCCC TGGAAGAACT GGCCTACAAC ACGAACGCCC TGCCCGGAAT TCGCTGCCGG TTTGAAACGG ATGGGCAGGT GTCGATCGAC AATCAGGAAG TCAAGCTGCA CCTGTACCGT ATTGCCCAGG AAGCCATCAA CAACGCGCTC AAACATGCGC AGGCTTCGGA GATCGTGCTG ACACTGCGCC GTCGGGACGA TGTCATTGAA CTCTGTGTGG CCGACAACGG CTGCGGCCTC GATCCGAGCC GGGCCCGCGC CGACTCGCTG GGATTGAAAA CCATGTACTA CCGGGCGCGC ACGATCGGCG GTACGCTGCG CATTCATTCG CGACCGGGCG AAGGGACCAC CATCTGCTGT CGCATCCCGG TGGGTGAAAT GCACGGAACT ACCTGA
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Protein sequence | MWPRVSFRTL FAGGGQSLSV PAMLDDETIP MKEEAPVSKE QRRARVEHAI VEAARLLVAP DPLDMEALLR ILGEATDAAS VYFVGVPQSG EAQDYSYTVW HRQQPKTPHW WQELEARLRK YFPTPATQDE VHQLGENLLV VPVLSAEDEF YGYLGLEFAD GLSEARQEEA RLLEVLGGLL ATYFDRRATE VARRESEERW RRLVEQLPEP ILLVARDALV YLNPAGRRLL GAEAEEDLTG RSLLDFFSAD QYDEVARQLR RLEAGEAVPP FEGSLIRFDG EERIVEITAA RVLFQGHPVV QLILRDLTER RRAEERYRAF VSTITEGIFR IELRQPVATT TLPDLQVEHL YQHGYLAECN AVMARWLGAE RPEEVAGRPL SSLRHYFRPR YLREFVQRGY QVHGEEYALS GKQGMRYFVV NAVGTVERDR LVRVWGSAVE VTERVELERR MVQTLEEQQQ AIGRDLHDGV GQLLTSVRML SENLATRLQA EQHELAELAQ KVVRFAQEAS EGVRTIYRGL TPAQLYTEDL TLALEELAYN TNALPGIRCR FETDGQVSID NQEVKLHLYR IAQEAINNAL KHAQASEIVL TLRRRDDVIE LCVADNGCGL DPSRARADSL GLKTMYYRAR TIGGTLRIHS RPGEGTTICC RIPVGEMHGT T
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