Gene Rmar_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1116 
Symbol 
ID8567762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1293332 
End bp1294003 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_003290395 
Protein GI268316676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.976198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCC TGTTGAAACG ACTGGCGCAA GGCATCTTTT TTCTGCTGGC TTTTTATTAC 
GGACTATGTA CGCTGGCCCT GCTGGCCTAC CGCTTCTGGT TCCCGCCGAT TACCGGAGTG 
CAACTGCAAC GATGTATCGA GAGCTGGCTG GCGGGAGAGT CCTGCCGGCG CACCTATTTG 
CCGCGTCCGC GCGCACAGCT TTCCGAACAG CTGGCCTGCG CCGTCGTGGC GGCCGAAGAT 
ACACGCTTTT ACACACACTG GGGCTTTGAC TGGGAGGCAT TGCGCGAAGC CTGGGAAGCC 
AACCGCCGCC AGCAACGCAT CCGTCGCGGG GGTTCCACCC TCACGCAGCA GCTGGTCAAA 
AACCTGTTCA TGACCACGCA CCGTTCGTAT CTGCGCAAAG CGATGGAAGC CCCGCTGACG 
CTCCTGGCGG AACTGCTTCT GTCCAAGGAA CGCATACTGA CGCTGTACCT GAACGTGGTG 
GAATGGGGGC CGGGCATTTA CGGGGCGGAA GCAGCCGCCC GGTACCATTA CGGTAAACCA 
GCCCACCAGC TCACCCGCTA TGAAGCGGCA GCGCTGGCGG CCTGCCTGCC GGCTCCCCTT 
CGGCGCCGTC CCCAGCAGAT GGGGTGGTAC ACCAGCATCA TTCTGGAACG CATGGGCCTG 
CTGGGATGCT GA
 
Protein sequence
MRRLLKRLAQ GIFFLLAFYY GLCTLALLAY RFWFPPITGV QLQRCIESWL AGESCRRTYL 
PRPRAQLSEQ LACAVVAAED TRFYTHWGFD WEALREAWEA NRRQQRIRRG GSTLTQQLVK 
NLFMTTHRSY LRKAMEAPLT LLAELLLSKE RILTLYLNVV EWGPGIYGAE AAARYHYGKP 
AHQLTRYEAA ALAACLPAPL RRRPQQMGWY TSIILERMGL LGC