| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1108 |
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| Symbol | |
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| ID | 8567754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1277719 |
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| End bp | 1281558 |
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| Gene Length | 3840 bp |
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| Protein Length | 1279 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase, beta subunit |
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| Protein accession | YP_003290387 |
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| Protein GI | 268316668 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.10244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGT TCAACGGCCA GCCGGGCACG AACGGACGGA TTTCGTTTGC CCGCACCAAG
ACGGTCCTGG ACTACCCCGA CCTCCTGGAG ATCCAACTGC AGGCCTTCAA GGAATTTGTG
CAGGACGACG TGCCGCCGGA GGAGCGTGAG GACAAAGGTC TTCAGGCGGT CTTCAAAGAG
CACTTTCCGA TTACCGACAG TCGGGAGCGC TACATCCTGG AATTCCTCTA CTACGCGCTG
GACACCCCCA AGCACACGAT CGAGGAGTGC CTGGCGCAGG GACTGACCTA TTCGGTCCCG
CTCAAGGCCA AGCTCCGACT GTCGATCCTG GAAGACGAGG ACGAAGAGGA GGCCGGGGAG
GCAATCGAAC AGGAAGTGTA CCTGGGCAAC CTGCCCTACA TGACCGAGCG CGGCACCTTC
ATCATCAACG GTGCCGAGCG CGTGATCGTC TCGCAGCTCC ACCGGAGTCC GGGCGTCTTC
TTCAGCCAGA GCGTCCACCC CAACGGGACG GAACTCTACT CGGCACGCGT CATCCCGCTG
CGCGGCTCGT GGCTGGAGTT CTCCACGGAC GTGGCCGGCA TCCTGTGGGC TTATATCGAC
CGGCGCAAGA AGATTCCGGT CACGACGCTG CTGCGCGCGC TGGGCTACTC CTCGGACGAG
GACATCATCC AGCTCTTCGA GCTGGCCGAA GAGGCCGATA TTTCGACGAA GAAGGCTTTC
AAAAACTATA TCGGCCGTAA GCTGGCCTCG TCGATTACGC TGGAACGCAT CATCGAGATC
GTCGACGAGG ACACCGGCGA GGTCCTGGAG GAAAAGCGTG AGCGCGAGGT GCTTCTGCCG
GCCGAACATG AGCTGCAGGA AGGGGACTAT GATCGGCTCA AAGAGGCCGG CATCACGAAA
CTCTACCTTC TGAAGGAGGA CGAAGACGAA GAGGAGGCGC TCGACAAAAG CCTGCTGCTG
AACACGCTTC GGAAAGACCC CACGCACTCG GAAGCCGAAG CGCTGGAATA CATTTACTTC
CAGCTACGCG GGACGGAGAC GCCCGATCTC GAGACGGCGC GCGCGCTGCT GGACCGGCTG
TTCTTCAATG AGAAGCGCTA CGACCTGGGG GCCGTCGGAC GCTACCGCCT CAACAAGCGG
CTGCGTCAGA ATACCCCCAT GGATGTCCTC ACGCTCACGA AGGAGGACAT CGTCGCCATC
GTGCGCGAGC TGGTGCTGCT GCAGAACGGC CGCAGCACGG TGGACGACAT CGACCACCTG
GGCAACCGCC GCGTGCGCAC GGTGGCCGAG CAGCTGGCGG CGCAGTTCTC GGTGGGGCTG
GCCCGCATGG CCCGTACCAT CAAAGAGCGC ATGAACCTGC GCGACGCCGA GAGCTTCACG
CCGCAGGACC TGGTCAACGC CCGCACGATC GCCAGCGTCA TCAACACGTT CTTTGGAACG
AACCAGCTCA GCCAGTTCAT GGATCAGACC AACCCGCTGG CCGAGCTGAC GCACAAGCGG
CGTGTGTCGG CGCTGGGGCC GGGTGGTCTG ACGCGCGAGC GGGCCGGCTT TGAGGTGCGT
GACGTGCACT ACACGCACTA CGGCCGTCTC TGCCCCATTG AGACGCCGGA AGGCCCCAAC
ATCGGACTGA TCTGCTCGCT GACGGTGCAC GCCCGGATTA ACGAGTTCGG CTTTATCGAG
ACGCCCTACC GGGTGGTGCG CAACGGCAAG GTGACGAACG AGATCGTCTA CCTGACGGCC
GAGGAAGAGG ACAACGCGGT CATCGCGCAG GCGAACGCGC CCATCGACGA GGAAGGCAAC
TTCCTCAACG AGTTCGTCAA GTGCCGCTAT CGCGGTGACT TCCCGTTGAT GCGGCCCGAG
CAGATCCAGT ACATGGACGT GGCGCCCAAC CAGATCGTCT CGCCCTCGGC CAGCCTGATT
CCGTTCCTGG AACACGACGA CGCCAACCGC GCACTCATGG GTTCGAACAT GCAGCGCCAG
GCCGTGCCGC TACTGCGGCC CGAGGCGCCC ATCGTGGGTA CGGGCATGGA AGCCCGCGTC
GCCCGCGACT CGCGCGCGCT GTTGGTGGCC GAAGGCCCGG GCGTCGTCGA GTACGTCGAT
GCCGAGCGCA TCGTCATCCG TTACGATCAG GACCCCGAGG ACGCCGAGGT CAGCTTCGAG
GAACCCGTCA AGGAGTACCG GCTGATCAAA TTCCGTCGCA CGAATCAGGA CACGTGCATC
AACATGCGGC CGATCGTCAA AGTCGGCCAG CGCGTCGAGA AGGGCACGGT GCTCTGCGAC
GGCTTTGCCA CCGAAAAGGG TGAGCTGGCC CTCGGCAAGA ACGTTCTGGT CGCCTTCATG
CCCTGGCGCG GCTACAACTT CGAGGACGCC ATTGTGATCT CGGAGCGTCT GGTGGCCGAG
GACGTCTTCA CCTCGGTGCA CATCGAGGAA TTCGAATGCC AGGTGCGCGA CACCAAGCGC
GGCCAGGAAG AGCTTACGCG GGAAATCCCG AACGTCTCCG AGGAGGCCAC GAAGGACCTC
GACGAGCGGG GCATCATCCG CGTGGGGGCC GAGGTGAAGG CCGGCGACAT CCTCGTGGGC
AAGGTCACGC CCAAGGGCGA GACGGAGCCC ACGCCCGAAG AGAAGCTGCT CCGGGCCATC
TTCGGCGACA AGGCCGGCGA TGTGAAGGAT GCCTCGCTGA AGGCGCCGCC AGGCATGAAG
GGCGTCGTGA TCGACACGAA GCTCTTCAGC CGCCGCAAGC TCGATCCGGC CTCGAAGAAG
CGGGAGCAGC AGCGGCTGGC CGAAATCGAC GAACAGCTGC AGCGGGACCT GGCCGAGCTT
GACCGTCGCT TCTGGGAGAA GTTCTTCAAC CTGGTCGAAG GACAGGTCTC GGCCGGCGTC
GAGACGCGTG AGGGCGACAT CGTGCTGCCC GAAGGCATGC CCTTCACGCG GGAAGCCTTC
GAGAAGATCT CGCCGCTGCG GCTGAATCCG ATGTTCCCCT TCACGCAGGA CGAGACCGTA
AACCGCAAGG TACAGAAGCT GCTCCGCAAC TACGAGCAGG TGCACCGGCG GATCACGGGC
GAGGCCAAGC GCCTCAAGCA CCAGATCCAG ATGGGGGACG AGCTGCCGCC CGGGATCGTG
CAACTGGCCA AAGTCTACAT CGCCCGCAAG CGCAAAATCC AGGTGGGCGA CAAGATGGCC
GGCCGGCACG GCAACAAGGG CGTAGTGGCC AAGATCGTCC CGGTCGAGGA CATGCCCTTC
CTTGAGGACG GGACGCCCGT GGACATTGTG CTCAACCCGC TGGGCGTGCC CTCCCGTATG
AACCTGGGGC AGATTTACGA GACACTCCTC GGCTGGGCCG GCAAGGTGCT GGGCCGGAAG
TTCGCCTCGC CGGTCTTCGA CGGCGCCACG CTCGACGACA TCAAGGCGCT GCTGCGCGAG
GCGGGGCTGC CCGAGGACGG CCGCGTCCAG CTCTACGACG GCCGTACGGG CGAGCCGCTC
GACGAAAAGA CCACGGTGGG TTACATCTAC ATGATGAAGC TCAACCACCT GGTCGAGGAC
AAGATTCACG CCCGGTCGAT CGGCCCCTAC AGCCTCATCA CGCAGCAGCC GCTGGGCGGT
AAGGCCCAGT TCGGCGGGCA GCGTCTGGGT GAGATGGAGG TGTGGGCGCT TTACGCCTAC
GGTGCCGCGC ACACGCTCCA GGAAATGCTC ACCTACAAGT CGGACGACGT GCAGGGCCGC
TCGAAGGCCT ATGAGGCCAT CGTCAAAGGT GAGAACCTGC CCGAGCCCGG CATCCCCGAA
AGCTTCAACG TGCTGGTGCG TGAGCTGCAG GGCCTCGGCC TGGAAGTGCG GCTCGACTGA
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| Protein sequence | MSEFNGQPGT NGRISFARTK TVLDYPDLLE IQLQAFKEFV QDDVPPEERE DKGLQAVFKE
HFPITDSRER YILEFLYYAL DTPKHTIEEC LAQGLTYSVP LKAKLRLSIL EDEDEEEAGE
AIEQEVYLGN LPYMTERGTF IINGAERVIV SQLHRSPGVF FSQSVHPNGT ELYSARVIPL
RGSWLEFSTD VAGILWAYID RRKKIPVTTL LRALGYSSDE DIIQLFELAE EADISTKKAF
KNYIGRKLAS SITLERIIEI VDEDTGEVLE EKREREVLLP AEHELQEGDY DRLKEAGITK
LYLLKEDEDE EEALDKSLLL NTLRKDPTHS EAEALEYIYF QLRGTETPDL ETARALLDRL
FFNEKRYDLG AVGRYRLNKR LRQNTPMDVL TLTKEDIVAI VRELVLLQNG RSTVDDIDHL
GNRRVRTVAE QLAAQFSVGL ARMARTIKER MNLRDAESFT PQDLVNARTI ASVINTFFGT
NQLSQFMDQT NPLAELTHKR RVSALGPGGL TRERAGFEVR DVHYTHYGRL CPIETPEGPN
IGLICSLTVH ARINEFGFIE TPYRVVRNGK VTNEIVYLTA EEEDNAVIAQ ANAPIDEEGN
FLNEFVKCRY RGDFPLMRPE QIQYMDVAPN QIVSPSASLI PFLEHDDANR ALMGSNMQRQ
AVPLLRPEAP IVGTGMEARV ARDSRALLVA EGPGVVEYVD AERIVIRYDQ DPEDAEVSFE
EPVKEYRLIK FRRTNQDTCI NMRPIVKVGQ RVEKGTVLCD GFATEKGELA LGKNVLVAFM
PWRGYNFEDA IVISERLVAE DVFTSVHIEE FECQVRDTKR GQEELTREIP NVSEEATKDL
DERGIIRVGA EVKAGDILVG KVTPKGETEP TPEEKLLRAI FGDKAGDVKD ASLKAPPGMK
GVVIDTKLFS RRKLDPASKK REQQRLAEID EQLQRDLAEL DRRFWEKFFN LVEGQVSAGV
ETREGDIVLP EGMPFTREAF EKISPLRLNP MFPFTQDETV NRKVQKLLRN YEQVHRRITG
EAKRLKHQIQ MGDELPPGIV QLAKVYIARK RKIQVGDKMA GRHGNKGVVA KIVPVEDMPF
LEDGTPVDIV LNPLGVPSRM NLGQIYETLL GWAGKVLGRK FASPVFDGAT LDDIKALLRE
AGLPEDGRVQ LYDGRTGEPL DEKTTVGYIY MMKLNHLVED KIHARSIGPY SLITQQPLGG
KAQFGGQRLG EMEVWALYAY GAAHTLQEML TYKSDDVQGR SKAYEAIVKG ENLPEPGIPE
SFNVLVRELQ GLGLEVRLD
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