Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1093 |
Symbol | |
ID | 8567734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1263188 |
End bp | 1266112 |
Gene Length | 2925 bp |
Protein Length | 974 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | type I site-specific deoxyribonuclease, HsdR family |
Protein accession | YP_003290372 |
Protein GI | 268316653 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTCG CCAGCGAACG CCGCATCGTC CAAAACCCCT TCATTCGCTA CGCCGAGGAG GCCGGCTGGC AGTATCTATC TCCGGAGGAA GCCCTGCGGC TCCGCGGCGG AGAGGATAGC CCCATCCTGC ACACCGTTTT TATCGAGCAA CTGCAGCGCT TAAACCCCGG AATTGTGGAT TCGGTGACCA AGGCCGAGGA GGTCTTCAAC CGTCTCATCC GCGTCCGGCC TAACATCGAA GGTAACCTGG AAGCCTGGGA GTACCTCAAG GGGATGAAAA CCGTCTTCGT CGAAGCCGAG CGCCGCGAGC GCAACCTGCG CCTGCTCGAT ACGGAGAACA TAGAGGCCAA TCGCTTCCAT GTCACCGACG AGTTTCGCTT CGTCAGCGGC CACGTCGCCA TCCGCGCGGA TGTGGTGCTC TTCGTCAACG GGATCCCCGT GATCGTGGTG GAAACCAAGG CGGCCACCCG CCCCGAAGGC ATTGCCGAAG CCTTCGACCA GATCCGCCGT TACCACCAGG AAGCGCCCGA ACTCATGGCC CAGGCGCAGA TCTTCGCCCT CACCCACCTG GTCAGGTTTT TCTACGGTGC CACCTGGAGC CTATCGCGCA AAACTCTCTT CAACTGGCGG GAAGATCTTG AGAGACAGCG CGCCGTGTCC CAACAACCTG CCGATTTCGA AACCCTGGTC AAATCCTTCG TCGCCCCACG GCGGGTGCTG CGCGTGCTCA CCGAATACAT CCTCTTCACC CGCCGTGATG GCGAGTTGAG TAAAGTGGTC CTGCGCCCCC ACCAGATGCG GGCCACCGAA AAGGTGATTG CCCGCGCTCG GGACCCGCAG AGGCGCCGCG GCCTGGTCTG GCACACCCAG GGTTCGGGCA AGACTTACAC CATGATTACG GTGGCCAAAC TACTGCTGGA GGACCCGCGC TTCCAGAACC CCACCGTCCT CATGATCGTG GACCGCAACG AACTCCAGCA GCAACTCTTC CAAAACCTGG AGTCCGTCGG CTTTGGCCGG GTGCATGTGG CCCGGAGCAA ACGTCATCTG CGCGAACTTT TGCGCCAGGA CACCCGCGGC CTGATCGTGT CCATGATCCA CAAGTTCGAC AAGGCCGACG CGAACTTCAA CACCCGCGCC AACATCTTCG TGCTCATCGA CGAAGCCCAC CGCTCCACCG GCGGCGACCT GGGCAACTAC CTGATGGGCG CCCTGCCCAA CGCTACCTTC ATCGGCTTCA CCGGCACGCC CATCGACAAA AGCGCCCACG GCAAGGGCAC CTTCAAGACC TTCGGCGGGG ACGACCCCGG CGGCTATCTG GACAAATACG CCATTCGCGA GTCCATCGAG GACGGCACCA CCGTGCCCCT GCACTACCAG ATGGCCCCCA ACGACCTGAT CGTGGACCGG AGCGCCATGG AAGCGGAGTT TTGGAAGGCC GCCGCCCTGG AGGGAGTGAC CGATGTGGAA GAACTCAACC GTGTCCTGGA CCGGGCCGTG ACCCTCAAGA ACCTGCTCAA GAACCGCCAG CGCGTGGAGC GCATTGCCTC CTTTGTGGCC AAGCACTACC GCACCTATGT GGAGCCCATG GGCTACAAAG CCTTTCTCGT CGCCGTGGAC CGCGAGGCCT GCGGCCTGTA CAAGGAAGCC CTGGATCACC ACCTGCCGCC GGAATACAGC CAGGTGGTCA TCAGCCGAGG GCATAACGAC CCGCCCGAAC TCAAGCGCTG GCATCTGAGC GATGAGGAAG AGGCAGCCGT GCGCAAAGCC TTCCGCAAGC CCGATCAGCC TCCCTACATC CTCATCGTCA CCGAAAAGCT GCTCACCGGC TACGACGCGC CCATCCTCTA CGCCATGTAC CTCGACAAGC CCATGCGCGA CCATGTGCTC CTGCAAGCCA TTGCGCGGGT CAACCGTCCC TATGAGGACG ACGAGGGCCG GCGCAAGACC AACGGCCTGA TCGTGGACTT CGTAGGCATC TTCGACAACC TGGAGCGGGC CCTGGCCTTC GATTCCCAGG ATGTGGAAGG GGTGGTGGAA GGGCTGGATG TGCTTAAGGA GCGCTTTGAG ATCTTGATGC AACAAGGGCG GGAGGCGTAT CTACCCCTGC GTGCAGGCAA AAGCGAAGAC AAGGCGGCCG AGGCCGTGCT GGAGCACTTC CGCGACCGGG AGGCGCGCGA GGCTTTCTAC GCCTACTTTC GCGAACTGCA GGAGGTGTAC GAAATCCTTT CGCCCGATCC CTTCCTGCGC CCTTTCCTGG AAGACTATCG CGCCCTGGTG GCGATGTACC GTCTGCTGCG CAGCGCCTAT GAGCCGCACG TGTCGGTAGA CAAATCCTTC CTGCGCAAGA CGGCCGAGAT CGTCCAACAA CACACCACCA CGCAGGCCGT CCACGAGCCC CAGGCCACCT ACGAGATCGG CGCCGGTGCG CTGCTGGCGC TCGTCGCTCA GGACAAACCC GACGCGGTCA AGGTTTTCAA CCTGCTCCGG GCACTGCATC GCCTGGTGGA AGCCCAAGGG AAGGAACAGC CCCACCTGAT CCCCATCGGC GAGCGGGCCG AAGCCATCCG TCAGGCTTAC GAAGCGCGGC AGATGAACAG CCAGCAGGCC TTGGAAGCCC TGAACGACCT GGTGCGCCGC CTGCAAGAAG CCGAGGAAGA GTGGCGCGAG AGCGACCTTA CACCGGAAGC CTTTGCCGTG GCCTGGTGGT TGCGGGTGCA AAAGGAGATG GACGCACCGC AAGCCCATCG TCTGGCCGCC CAAATCGAAC CGGCCTTCCA GGCCTTCCCC CACTGGGCCA CCAGCCAGTA CCAGGAGCGC GAGCTGCGCA AGCAACTCTA CAAAATCCTG GTCGAGGCGG GAGTCAAGGA AGTGGTCGCC TGGGCCGACG AAGTGTTGAC CCTGTTACGG GGGATATCCT CATGA
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Protein sequence | MTLASERRIV QNPFIRYAEE AGWQYLSPEE ALRLRGGEDS PILHTVFIEQ LQRLNPGIVD SVTKAEEVFN RLIRVRPNIE GNLEAWEYLK GMKTVFVEAE RRERNLRLLD TENIEANRFH VTDEFRFVSG HVAIRADVVL FVNGIPVIVV ETKAATRPEG IAEAFDQIRR YHQEAPELMA QAQIFALTHL VRFFYGATWS LSRKTLFNWR EDLERQRAVS QQPADFETLV KSFVAPRRVL RVLTEYILFT RRDGELSKVV LRPHQMRATE KVIARARDPQ RRRGLVWHTQ GSGKTYTMIT VAKLLLEDPR FQNPTVLMIV DRNELQQQLF QNLESVGFGR VHVARSKRHL RELLRQDTRG LIVSMIHKFD KADANFNTRA NIFVLIDEAH RSTGGDLGNY LMGALPNATF IGFTGTPIDK SAHGKGTFKT FGGDDPGGYL DKYAIRESIE DGTTVPLHYQ MAPNDLIVDR SAMEAEFWKA AALEGVTDVE ELNRVLDRAV TLKNLLKNRQ RVERIASFVA KHYRTYVEPM GYKAFLVAVD REACGLYKEA LDHHLPPEYS QVVISRGHND PPELKRWHLS DEEEAAVRKA FRKPDQPPYI LIVTEKLLTG YDAPILYAMY LDKPMRDHVL LQAIARVNRP YEDDEGRRKT NGLIVDFVGI FDNLERALAF DSQDVEGVVE GLDVLKERFE ILMQQGREAY LPLRAGKSED KAAEAVLEHF RDREAREAFY AYFRELQEVY EILSPDPFLR PFLEDYRALV AMYRLLRSAY EPHVSVDKSF LRKTAEIVQQ HTTTQAVHEP QATYEIGAGA LLALVAQDKP DAVKVFNLLR ALHRLVEAQG KEQPHLIPIG ERAEAIRQAY EARQMNSQQA LEALNDLVRR LQEAEEEWRE SDLTPEAFAV AWWLRVQKEM DAPQAHRLAA QIEPAFQAFP HWATSQYQER ELRKQLYKIL VEAGVKEVVA WADEVLTLLR GISS
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