Gene Rmar_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1093 
Symbol 
ID8567734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1263188 
End bp1266112 
Gene Length2925 bp 
Protein Length974 aa 
Translation table11 
GC content63% 
IMG OID 
Producttype I site-specific deoxyribonuclease, HsdR family 
Protein accessionYP_003290372 
Protein GI268316653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTCG CCAGCGAACG CCGCATCGTC CAAAACCCCT TCATTCGCTA CGCCGAGGAG 
GCCGGCTGGC AGTATCTATC TCCGGAGGAA GCCCTGCGGC TCCGCGGCGG AGAGGATAGC
CCCATCCTGC ACACCGTTTT TATCGAGCAA CTGCAGCGCT TAAACCCCGG AATTGTGGAT
TCGGTGACCA AGGCCGAGGA GGTCTTCAAC CGTCTCATCC GCGTCCGGCC TAACATCGAA
GGTAACCTGG AAGCCTGGGA GTACCTCAAG GGGATGAAAA CCGTCTTCGT CGAAGCCGAG
CGCCGCGAGC GCAACCTGCG CCTGCTCGAT ACGGAGAACA TAGAGGCCAA TCGCTTCCAT
GTCACCGACG AGTTTCGCTT CGTCAGCGGC CACGTCGCCA TCCGCGCGGA TGTGGTGCTC
TTCGTCAACG GGATCCCCGT GATCGTGGTG GAAACCAAGG CGGCCACCCG CCCCGAAGGC
ATTGCCGAAG CCTTCGACCA GATCCGCCGT TACCACCAGG AAGCGCCCGA ACTCATGGCC
CAGGCGCAGA TCTTCGCCCT CACCCACCTG GTCAGGTTTT TCTACGGTGC CACCTGGAGC
CTATCGCGCA AAACTCTCTT CAACTGGCGG GAAGATCTTG AGAGACAGCG CGCCGTGTCC
CAACAACCTG CCGATTTCGA AACCCTGGTC AAATCCTTCG TCGCCCCACG GCGGGTGCTG
CGCGTGCTCA CCGAATACAT CCTCTTCACC CGCCGTGATG GCGAGTTGAG TAAAGTGGTC
CTGCGCCCCC ACCAGATGCG GGCCACCGAA AAGGTGATTG CCCGCGCTCG GGACCCGCAG
AGGCGCCGCG GCCTGGTCTG GCACACCCAG GGTTCGGGCA AGACTTACAC CATGATTACG
GTGGCCAAAC TACTGCTGGA GGACCCGCGC TTCCAGAACC CCACCGTCCT CATGATCGTG
GACCGCAACG AACTCCAGCA GCAACTCTTC CAAAACCTGG AGTCCGTCGG CTTTGGCCGG
GTGCATGTGG CCCGGAGCAA ACGTCATCTG CGCGAACTTT TGCGCCAGGA CACCCGCGGC
CTGATCGTGT CCATGATCCA CAAGTTCGAC AAGGCCGACG CGAACTTCAA CACCCGCGCC
AACATCTTCG TGCTCATCGA CGAAGCCCAC CGCTCCACCG GCGGCGACCT GGGCAACTAC
CTGATGGGCG CCCTGCCCAA CGCTACCTTC ATCGGCTTCA CCGGCACGCC CATCGACAAA
AGCGCCCACG GCAAGGGCAC CTTCAAGACC TTCGGCGGGG ACGACCCCGG CGGCTATCTG
GACAAATACG CCATTCGCGA GTCCATCGAG GACGGCACCA CCGTGCCCCT GCACTACCAG
ATGGCCCCCA ACGACCTGAT CGTGGACCGG AGCGCCATGG AAGCGGAGTT TTGGAAGGCC
GCCGCCCTGG AGGGAGTGAC CGATGTGGAA GAACTCAACC GTGTCCTGGA CCGGGCCGTG
ACCCTCAAGA ACCTGCTCAA GAACCGCCAG CGCGTGGAGC GCATTGCCTC CTTTGTGGCC
AAGCACTACC GCACCTATGT GGAGCCCATG GGCTACAAAG CCTTTCTCGT CGCCGTGGAC
CGCGAGGCCT GCGGCCTGTA CAAGGAAGCC CTGGATCACC ACCTGCCGCC GGAATACAGC
CAGGTGGTCA TCAGCCGAGG GCATAACGAC CCGCCCGAAC TCAAGCGCTG GCATCTGAGC
GATGAGGAAG AGGCAGCCGT GCGCAAAGCC TTCCGCAAGC CCGATCAGCC TCCCTACATC
CTCATCGTCA CCGAAAAGCT GCTCACCGGC TACGACGCGC CCATCCTCTA CGCCATGTAC
CTCGACAAGC CCATGCGCGA CCATGTGCTC CTGCAAGCCA TTGCGCGGGT CAACCGTCCC
TATGAGGACG ACGAGGGCCG GCGCAAGACC AACGGCCTGA TCGTGGACTT CGTAGGCATC
TTCGACAACC TGGAGCGGGC CCTGGCCTTC GATTCCCAGG ATGTGGAAGG GGTGGTGGAA
GGGCTGGATG TGCTTAAGGA GCGCTTTGAG ATCTTGATGC AACAAGGGCG GGAGGCGTAT
CTACCCCTGC GTGCAGGCAA AAGCGAAGAC AAGGCGGCCG AGGCCGTGCT GGAGCACTTC
CGCGACCGGG AGGCGCGCGA GGCTTTCTAC GCCTACTTTC GCGAACTGCA GGAGGTGTAC
GAAATCCTTT CGCCCGATCC CTTCCTGCGC CCTTTCCTGG AAGACTATCG CGCCCTGGTG
GCGATGTACC GTCTGCTGCG CAGCGCCTAT GAGCCGCACG TGTCGGTAGA CAAATCCTTC
CTGCGCAAGA CGGCCGAGAT CGTCCAACAA CACACCACCA CGCAGGCCGT CCACGAGCCC
CAGGCCACCT ACGAGATCGG CGCCGGTGCG CTGCTGGCGC TCGTCGCTCA GGACAAACCC
GACGCGGTCA AGGTTTTCAA CCTGCTCCGG GCACTGCATC GCCTGGTGGA AGCCCAAGGG
AAGGAACAGC CCCACCTGAT CCCCATCGGC GAGCGGGCCG AAGCCATCCG TCAGGCTTAC
GAAGCGCGGC AGATGAACAG CCAGCAGGCC TTGGAAGCCC TGAACGACCT GGTGCGCCGC
CTGCAAGAAG CCGAGGAAGA GTGGCGCGAG AGCGACCTTA CACCGGAAGC CTTTGCCGTG
GCCTGGTGGT TGCGGGTGCA AAAGGAGATG GACGCACCGC AAGCCCATCG TCTGGCCGCC
CAAATCGAAC CGGCCTTCCA GGCCTTCCCC CACTGGGCCA CCAGCCAGTA CCAGGAGCGC
GAGCTGCGCA AGCAACTCTA CAAAATCCTG GTCGAGGCGG GAGTCAAGGA AGTGGTCGCC
TGGGCCGACG AAGTGTTGAC CCTGTTACGG GGGATATCCT CATGA
 
Protein sequence
MTLASERRIV QNPFIRYAEE AGWQYLSPEE ALRLRGGEDS PILHTVFIEQ LQRLNPGIVD 
SVTKAEEVFN RLIRVRPNIE GNLEAWEYLK GMKTVFVEAE RRERNLRLLD TENIEANRFH
VTDEFRFVSG HVAIRADVVL FVNGIPVIVV ETKAATRPEG IAEAFDQIRR YHQEAPELMA
QAQIFALTHL VRFFYGATWS LSRKTLFNWR EDLERQRAVS QQPADFETLV KSFVAPRRVL
RVLTEYILFT RRDGELSKVV LRPHQMRATE KVIARARDPQ RRRGLVWHTQ GSGKTYTMIT
VAKLLLEDPR FQNPTVLMIV DRNELQQQLF QNLESVGFGR VHVARSKRHL RELLRQDTRG
LIVSMIHKFD KADANFNTRA NIFVLIDEAH RSTGGDLGNY LMGALPNATF IGFTGTPIDK
SAHGKGTFKT FGGDDPGGYL DKYAIRESIE DGTTVPLHYQ MAPNDLIVDR SAMEAEFWKA
AALEGVTDVE ELNRVLDRAV TLKNLLKNRQ RVERIASFVA KHYRTYVEPM GYKAFLVAVD
REACGLYKEA LDHHLPPEYS QVVISRGHND PPELKRWHLS DEEEAAVRKA FRKPDQPPYI
LIVTEKLLTG YDAPILYAMY LDKPMRDHVL LQAIARVNRP YEDDEGRRKT NGLIVDFVGI
FDNLERALAF DSQDVEGVVE GLDVLKERFE ILMQQGREAY LPLRAGKSED KAAEAVLEHF
RDREAREAFY AYFRELQEVY EILSPDPFLR PFLEDYRALV AMYRLLRSAY EPHVSVDKSF
LRKTAEIVQQ HTTTQAVHEP QATYEIGAGA LLALVAQDKP DAVKVFNLLR ALHRLVEAQG
KEQPHLIPIG ERAEAIRQAY EARQMNSQQA LEALNDLVRR LQEAEEEWRE SDLTPEAFAV
AWWLRVQKEM DAPQAHRLAA QIEPAFQAFP HWATSQYQER ELRKQLYKIL VEAGVKEVVA
WADEVLTLLR GISS