Gene Rmar_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1090 
Symbol 
ID8567731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1259724 
End bp1261070 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content63% 
IMG OID 
Productputative transcriptional regulator 
Protein accessionYP_003290369 
Protein GI268316650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.846726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGC TTGAGGCTAC GGAAGGCCAA ACCCTGGAGT TCAAAAGGCA ATGGACCGAT 
CGGGCTCTGG AGGATCTGGC GGCCTTCGCC AACACGGAAG GCGGTAGGCT CCTCCTCGGC
GTCCGAGACG ATGGGGAAGT TGTGGGCACG CGAGCGGATG ACCGAGAACT CCAGCGCATC
GCCAACCTCA TCGCCGCCCA TCTGGGCATC ACGCCGTCGG TTCGCGTGAT TGAGATGCAG
GGCCTGCCGG TGGTGGAAAT TCGGGTAGAT CCGGCCCCGG GGTTGGTGCC CTACAAGGGG
CGGTATCTCC GCCGCGTGGG CACCACAAAC CGCGATTTCT CGCCCGAGGA ACTGGCCCGC
CACATTCTCA CGCGTTCCGG GAGGAGTTGG GATGGGCTGC CCAGCGATTG GTCGCTGGAG
GAGGTGGACC CGAAAGCCCT GAAGGCCTTT GCCCGCCTGG CTCGAGAGAG GCTTCCCCAT
CTCGATCCCT CCGATCCCGA AGGGACGCTG CGCAACCTCA ACCTCGTAGA GGGGAAGCGG
CTGAAGAACG CAGGGGTGCT GCTCTTTGGC AAGCGGCCCC AGCGCCTCTT TCCCCAGGCG
CAGGTGCGCG TCGGCATCTT CCGGGGAGAT GAGATCCTGG ATAGCCACGA TTTCACGGGC
ACCTTGTGGG AGCAGTTAGA CGGGGTGATG GCGCGCTTTC GCCAGGTGCT CAAGGTGCGT
TTCGCCATCC GGGTGGAAGA GCCGTCTTTA GCGGGGCTAC AGCGTGAAGA GACATGGGAA
TATCCGCTGG AGGCCCTGCG GGAGGCGGTG GTGAACGCCC TCATCCACCG GGATTACACC
TATCCGGCGG ACATCCAGAT CCGTTTGGAG GAAGATCGCT TGGAGGTTTG GAGTCCGGGG
GAGTTGCCGT CGCCGCTTAC GCCTGAGCAG CTCTATCAAC CCCACTCGTC GGTGCTTCGT
AATCCCCTTC TCGCCCAGGC CTTCTACTTT GCCGGCGTCA TCGAACGCTG GGGCACGGGC
ACCACGCGCA TCGTCCGCCT CTGCCGGGAG CAAGGGCTTC CGGAGCCCGA GTTTGCGAAC
TGGCAGGGTG GCTTTCGGGT GACCTTCCTG AAGGACCCTT ACACCCCGGA GCGGCTGCGC
AAGTTGGGCC TGAACGAGCG GCAGATCAGG GCGGTGCTGT ATGTGAAGGA GCATGGGGAG
ATCTCGAATC GTGACTACAG AAGTCTGACA GGTGTGTCGG ACGAAACGGC CCGCCAAGAC
CTCCTGGCGC TGGTCAAACT GAACATATTG CGGGTTGAAG GCAAGGGGAG GGCAACGAGG
TATGTGCTGG GGAGTTTTGG CGATTAA
 
Protein sequence
MEKLEATEGQ TLEFKRQWTD RALEDLAAFA NTEGGRLLLG VRDDGEVVGT RADDRELQRI 
ANLIAAHLGI TPSVRVIEMQ GLPVVEIRVD PAPGLVPYKG RYLRRVGTTN RDFSPEELAR
HILTRSGRSW DGLPSDWSLE EVDPKALKAF ARLARERLPH LDPSDPEGTL RNLNLVEGKR
LKNAGVLLFG KRPQRLFPQA QVRVGIFRGD EILDSHDFTG TLWEQLDGVM ARFRQVLKVR
FAIRVEEPSL AGLQREETWE YPLEALREAV VNALIHRDYT YPADIQIRLE EDRLEVWSPG
ELPSPLTPEQ LYQPHSSVLR NPLLAQAFYF AGVIERWGTG TTRIVRLCRE QGLPEPEFAN
WQGGFRVTFL KDPYTPERLR KLGLNERQIR AVLYVKEHGE ISNRDYRSLT GVSDETARQD
LLALVKLNIL RVEGKGRATR YVLGSFGD