| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1081 |
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| Symbol | |
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| ID | 8567722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1249172 |
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| End bp | 1251526 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003290361 |
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| Protein GI | 268316642 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000550104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTGC TGCATCTGAA AGCTGCAGCG CAGGAGCGAC CGGCGTATCT GGACCCGACG
CTTCCCATCG AAGTGCGCGT CGAGGACCTG CTTGGCCGCA TGACGCTCGA AGAAAAAGTC
GCCCAGATGC TGAGCATGTG GCAGACGAAG CGGTTGATCG TCGACGAGCA GAATCGCTTC
GATCCGAGCC GGGCGCCGGA ATGGTTCAAA CTGGGCATTG GCCGCATCGA GCGGCCGAGC
GAGTATTTCC AGACGGCGCG CGAGGCGGCC GCTTTCACCA ACGCCATCCA GCGCTGGGTC
AGAGAAAACA CACGACTGGG CATCCCCGTG CTTTTCCACG AGGAAGCCCT CCACGGCATT
CAGGCCTATG AGGCGACCAG TTATCCGCAG GCGATTGCGT TGGCGAGCAC GTGGAATCCG
GCGCTGGTGG AGCGGGTCTA CGGGCGGATT GCGCGGGAGG TGCGGGCGCG CGGGGTGCAT
CAGGTGCTGG CGCCGGTGGT GGACGTGGGT CGGGAGCCGC GCTGGGGTCG AATCGAGGAG
ACCTTTGGGG AGGATCCGTA CCTGGTGGCG GAGATGGGGA AGGCGGCCGT GTGGGGGTTG
CAGGGCCGTC GGGTTCCGCC GGTGGGACCG GGTCATGTGA TTGCGACGCT GAAGCACATG
ACGGGTCATG GTCAGCCGGA GAGCGGGATC AACGTGGCGC CGGTGTTTTT CGGGGAGCGT
CATTTGCGGG AGGTGTTTTT GTATCCGTTT CGGGAGGCGG TGGAGAAGGC GCATGCGCTG
AGTGTGATGG CTTCGTACAA TGAGGTGGAC GGGATACCGT CGCATGTGAA CGCGTGGATG
TTGCGGGATG TGTTGCGGGG CGAGTGGGGC TTCCGCGGCG TCATCGTCTC CGACTGGTTT
GCGATTCGTC AGCTCATCAC GAAGCATCAT GTAGCAGCCG ACGAGGCCGA AGCAGCGCGG
CGGGCGCTGG CCGCCACGGT GGACATCGAA CTCCCGGACT ACGATGTGTA CCCGGTATTG
CTGGAGCAGG TAAAAAAGGG GTTGATTCCG GAGTCGGCGA TAGACGAGGC GGTTCGTCGG
TTGTTGTGGG CGAAGTTTGC GGTGGGATTG TTTGACGGGG AGCCGTATGT GGACGAGGCG
GAGGCTTCGC GGGTGAACGC CTCGGAGGAG GATCGGGCGC TGGCGTTGGA GGCGGCGCGC
GAGGCGATCA TTTTGTTGAA GAACGACGGG TTGTTGCCGT TGGAGGCGGG TCGGTTGGAT
CGGGTGGCGG TGATTGGGCC GCATGCGGGG GAGGTGTTGC TGGGGGGATA TTCGGGGCGT
CCGCGTTACA CGGTGAGCAT ACTGGAGGGG TTGCGTGAGC GGTTGCGTGG GGAGGCGGAG
GTGTTGTATG CGGAGGGGGT TCGGATCACG GAAGACTCGG TCTTCACCGA CGAACCCCAG
CCGCACCTCG GAGGCGAGCG CGCCTATCCG CGCTGGGTGG CCGACACGGT GGTCTGGACC
GATCCGGAAT CCAACCGCCG ACGCATCGAG GAGGCGGTCG CGCTGGCCCG TCGGAGTGAT
GTGGCGATTC TGGTGGTTGG CGGCAACGAG CAGACTTCGC GTGAGGCCTG GGCGGTGAAC
CATCTTGGAG ATCGTTTGTC GTTGCGGTTG CCGGGTCAGC AGGAGGAGTT GGTGAAGGCG
GTGTTGGCGA CGGGAGTGCC GGTGGTGCTG GTGGTGATTG GCGGGCAGCC GTACGTGATC
ACGGAGTTAG TGGACCGGGT GGGGGCGATC GTGTGGGGCT GGTATCTGGG TCAGGAGACG
GGTCGTGCGG TGGCGGAGGT GTTGCTGGGG GATTACAATC CGGCGGGCCG TTTGCCGATC
ACGATACCGC GTCACGAGGG GCAGCTTCCG GCCTATTACA GTCACAAGCC GAGCAAGGAG
TTGGACTACG TGGACGGTAC GAGTCGGCCG CTTTTCCCGT TCGGGTATGG TTTGTCGTAC
ACGCGTTTTG CGTATCGGAG TGTTCGGTTG GAGCCGGATC GGGTGGGGGG ATGTGGAGTG
GTTCGGGTGC TGGTGGAGTT GGAGAACGTG GGGGATCGTG CCGGGGATGA GGTGGTGCAG
GTGTATGTTC GGGATCGGGT GAGCAGTGTG GCGCGACCGG TGAAGGAGTT GAAGGGATTT
CGTCGGGTGC ATTTGGGGCC GGGGGAGCGG AAGGTAGTGG AGATTGAGCT GGGGCCGGAG
GCGTTTGCGT TTTACGGCTT GGAGATGGAG CGGGTGGTGG AGGCGGGGTG GTTTGATGTG
CTGGTGGGGG GTAATTCGGA GGAGTTGATC AGCGTGCCCC TGGAAATCAC CGAAGACTGC
AATCTGGGGC CCTGA
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| Protein sequence | MLLLHLKAAA QERPAYLDPT LPIEVRVEDL LGRMTLEEKV AQMLSMWQTK RLIVDEQNRF
DPSRAPEWFK LGIGRIERPS EYFQTAREAA AFTNAIQRWV RENTRLGIPV LFHEEALHGI
QAYEATSYPQ AIALASTWNP ALVERVYGRI AREVRARGVH QVLAPVVDVG REPRWGRIEE
TFGEDPYLVA EMGKAAVWGL QGRRVPPVGP GHVIATLKHM TGHGQPESGI NVAPVFFGER
HLREVFLYPF REAVEKAHAL SVMASYNEVD GIPSHVNAWM LRDVLRGEWG FRGVIVSDWF
AIRQLITKHH VAADEAEAAR RALAATVDIE LPDYDVYPVL LEQVKKGLIP ESAIDEAVRR
LLWAKFAVGL FDGEPYVDEA EASRVNASEE DRALALEAAR EAIILLKNDG LLPLEAGRLD
RVAVIGPHAG EVLLGGYSGR PRYTVSILEG LRERLRGEAE VLYAEGVRIT EDSVFTDEPQ
PHLGGERAYP RWVADTVVWT DPESNRRRIE EAVALARRSD VAILVVGGNE QTSREAWAVN
HLGDRLSLRL PGQQEELVKA VLATGVPVVL VVIGGQPYVI TELVDRVGAI VWGWYLGQET
GRAVAEVLLG DYNPAGRLPI TIPRHEGQLP AYYSHKPSKE LDYVDGTSRP LFPFGYGLSY
TRFAYRSVRL EPDRVGGCGV VRVLVELENV GDRAGDEVVQ VYVRDRVSSV ARPVKELKGF
RRVHLGPGER KVVEIELGPE AFAFYGLEME RVVEAGWFDV LVGGNSEELI SVPLEITEDC
NLGP
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