| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1080 |
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| Symbol | |
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| ID | 8567721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1246734 |
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| End bp | 1249112 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003290360 |
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| Protein GI | 268316641 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.353054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTGG GAATTGTCTT CCTGTTGCTG CTCTGGAGCT GCGCCGCATG GGCGCAGGAG
CGACCGGCGT ATCTGGACCC GACGCTTCCC ATCGAAGTGC GCGTCGAGGA CCTGCTCGGC
CGCATGACGC TCGAAGAAAA AGTCGCCCAG ATGCTGAGTA TGCGACAGAC GAAGCGGTTG
ATCGTCGACG AGCAGAATCG CTTCGATCCG AGCCGGGCGC CGGAATGGTT CAAACTGGGC
ATTGGCCGCA TCGAGCGGCC GAGCGAGTAT TTCCAGACGG CGCGCGAGGC GGCCGCCTTC
ACCAACGCCA TCCAGCGCTG GGTCAGAGAA AACACACGGC TGGGGATCCC GGTGATCTTT
CACGAAGAGG CGTTGCACGG TCTGCGTGCG GCCGAAGCCA CAAGCTATCC GCAGGCGATT
GCGCTGGCGA GCACGTGGAA TCCGGCGCTG GTGGAGCGGG TCTACGGGCG GATTGCGCGG
GAGGTGCGGG CGCGCGGGGT GCATCAGGTG CTGGCGCCGG TGGTGGACGT GGGTCGGGAG
CCGCGCTGGG GTCGGATCGA GGAGACCTTT GGGGAGGATC CGTACCTGGT GGCGGAGATG
GGGAAGGCGG CCGTGTGGGG GTTGCAGGGC CGTCGGGTTC CGCCGGTGGG ACCGGGTCAT
GTGATTGCGA CGCTGAAGCA CATGGCGGGT CATGGTCAGC CGGAGAGTGG GATCAACGTG
GCGCCGGTGT TTTTCGGGGA GCGTCATTTG CGGGAGGTGT TTTTGTATCC GTTTCGGGAG
GCGGTGGAGA AGGCGCATGC GCTGAGTGTG ATGGCTTCGT ACAATGAGAT TGACGGGATA
CCGTCGCATG CGAACGCGTG GATGTTGCGG GATGTGTTGC GGGGCGAGTG GGGCTTCCGC
GGCGTCATCG TCTCCGACTG GCATGGCATT CCTCAGCTGA TTACCCGTCA TCATGTAGCC
GAAAACCTGG AGGAAGCCGC CCGTCTGGCC CTTCAGGCTA CCGTAGATGT GGAATTGCCC
GACTACGAAG CCTACGCGAC GCTGGTCGAT CAGGTGCGTC GGGGACTGAT TCCGGAGTTG
GCGGTTGACG AGGCGGTTCG TCGGTTATTA TGGGCAAAGT TTGCAGTGGG ATTGTTTGAC
GGGGAGCCGT ATGTGGACGA GGCGGAGGCT TCGCGGGTGA ACGCGTCGGA GGAGGATCGG
GCGCTGGCGT TGGAGGCGGC GCGCGAGGCG ATCATTTTGT TGAAGAACGA CGGGTTGTTG
CCGTTGGAGG CGGGTCGTTT GGATCGGGTG GCGGTGATTG GGCCGCATGC GGGGGAGGTG
TTGCTGGGGG GATATTCGGG GCGTCCGCGT TACACGGTGA GCATACTGGA GGGGTTGCGT
GAGCGGTTGC GTGGGGAGGC GGAGGTGTTG TATGCGGAGG GAGTTCGGAT CACGGAAGAC
TCGGTCTTCA CCGACGAACC CCAGCCGCAC CTCGGCGGCA CATGGGCCCG GCAGCGCAAT
GCTGCACATC GCGTTGTGTT CACGCCGCCC GAGGCGAACC GGTCGCGCAT CGAAGAGGCG
GTCGCGCTGG CCCGCACGAG CGATGTAGTG GTGCTGGTCG TGGGTGGTAA TGAGCAGACC
GCCCGTGAGG CTTATGCGCC GTATCATCTT GGAGATCGTT TGTCGTTGCG GTTGCCGGGT
CAGCAGGAGG AGTTGGTGAA GGCGGTGTTG GCGACGGGTG TGCCGGTGGT GCTGGTGGTG
ATTGGAGGTC GGCCGTACGT GATCACGGAG TTAGTGGACC GGGTGGGGGC GATCGTGTGG
GGCTGGTATC TGGGTCAGGA GACGGGTCGT GCGGTGGCGG AGGTGTTGCT GGGGGATTAC
AATCCGGCGG GCCGTTTGCC GATCACGATA CCGCGTCACG AGGGGCAGCT TCCGGCCTAT
TACAGTCACA AGCCGAGCAA GGAATTGGAC TACGTGGACG GTACGAGTCG GCCGCTTTTC
CCGTTCGGGT ATGGTTTGTC GTACACGCGT TTTGCGTATC GGAGTGTTCG GTTGGAGCCG
GATCGGGTGG GGGGATGTGG AGTGGTTCGG GTGCTGGTGG AGTTGGAGAA CGTGGGGGAT
CGTGCCGGGG ATGAGGTGGT GCAGGTGTAT GTTCGGGATC GGGTGAGCAG TGTGGCGCGA
CCGGTGAAGG AGTTGAAGGG ATTTCGTCGG GTGCATTTGG GGCCGGGGGA GCGGAAGGTA
GTGGAGATTG AGCTGGGGCC GGAGGCGTTT GCGTTTTACG GCTTGGAGAT GGAGCGGGTG
GTGGAGGCGG GGTGGTTTGA TGTGCTGGTG GGGGGTAATT CGGAGGAGTT GATCAGCGTG
CCCCTGGAAA TCACCGAGGG CTGTAACCTG GGACGATAG
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| Protein sequence | MRLGIVFLLL LWSCAAWAQE RPAYLDPTLP IEVRVEDLLG RMTLEEKVAQ MLSMRQTKRL
IVDEQNRFDP SRAPEWFKLG IGRIERPSEY FQTAREAAAF TNAIQRWVRE NTRLGIPVIF
HEEALHGLRA AEATSYPQAI ALASTWNPAL VERVYGRIAR EVRARGVHQV LAPVVDVGRE
PRWGRIEETF GEDPYLVAEM GKAAVWGLQG RRVPPVGPGH VIATLKHMAG HGQPESGINV
APVFFGERHL REVFLYPFRE AVEKAHALSV MASYNEIDGI PSHANAWMLR DVLRGEWGFR
GVIVSDWHGI PQLITRHHVA ENLEEAARLA LQATVDVELP DYEAYATLVD QVRRGLIPEL
AVDEAVRRLL WAKFAVGLFD GEPYVDEAEA SRVNASEEDR ALALEAAREA IILLKNDGLL
PLEAGRLDRV AVIGPHAGEV LLGGYSGRPR YTVSILEGLR ERLRGEAEVL YAEGVRITED
SVFTDEPQPH LGGTWARQRN AAHRVVFTPP EANRSRIEEA VALARTSDVV VLVVGGNEQT
AREAYAPYHL GDRLSLRLPG QQEELVKAVL ATGVPVVLVV IGGRPYVITE LVDRVGAIVW
GWYLGQETGR AVAEVLLGDY NPAGRLPITI PRHEGQLPAY YSHKPSKELD YVDGTSRPLF
PFGYGLSYTR FAYRSVRLEP DRVGGCGVVR VLVELENVGD RAGDEVVQVY VRDRVSSVAR
PVKELKGFRR VHLGPGERKV VEIELGPEAF AFYGLEMERV VEAGWFDVLV GGNSEELISV
PLEITEGCNL GR
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