Gene Rmar_1079 details

Gene Information

• Locus tag: Rmar_1079
• ID: 8567720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1244490
• End bp: 1246670
• Gene Length: 2181 bp
• Protein Length: 726 aa
• Translation table: 11
• GC content: 64%
• Product: Alpha-glucuronidase
• Protein accession: YP_003290359
• Protein GI: 268316640

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATCGGT TGATTTTATG GATCCTTCTG CTGGCAGGCA TTGGCTTCTG GAGCCGGCCA 
GGCGTGGCGG AAGACGGCTA TCAGCTCTGG TTGCGCTACG TGCGCATCGA GGATGAAGCG 
CTCCGACAAC GCTACCTGCA ACAGTTCCGA GCGCTTCACT TGGAGGCCAC CTCGCCTACG 
CTCGAAATCG TTCAGGAGGA GCTCCGGCGC GGCCTGCAGG GATTGCTCGG CACGTCGATT 
CCATCGGTGG ACCGGGTCGA AGAAGGGGTG CTGCTGGTCG GCACACCGGC TTCTTGCCCG 
ACCGTCGCGG CGCTGGGGCT GGAGGCGGAG CTGCAGGCGC TGGGCGACGA AGGGTTCCTG 
CTCCGAACCA TGACGGTAGA AGGACACCGC GCCACGGTAC TGGCCGCTGC AAGCGATGTG 
GGCGTGCTCT ACGGTGCTTT TCATCTGCTG CGCCTGCTTC AGACGCACCG GCCGATCGAT 
TCGCTGAATG TTCGCGAAGC GCCCCGCGTG CGGCTGCGCG TGCTCAACCA CTGGGACAAC 
CTCGATCGCA CCGTCGAACG CGGCTATGCC GGCTTTTCGC TCTGGGACTG GTTCAAACTC 
CCGGACTACA TCGACCCGCG CTACCGCGAC TATGCCCGCG CCAACGCTTC GCTGGGCATC 
AACGGCACGG TGCTGACCAA CGTCAACGCC GACGCGCGGG TGCTTTTGCC GGAATTTCTG 
GAAAAGGTGG CGGCGCTGGC CGACATCTTC CGGCCCTACG GTATCCGGGT GTACCTGACG 
GCGCGTTTCA GTGCCCCCAT CGAAATCGGG GGACTCGACA CGGCCGATCC GCTCGATCCC 
GACGTCCGGG CCTGGTGGCG GGAAAAGGTG GCGGAAATCT ATCGCTACAT TCCGGACTTC 
GGGGGCTTTC TGGTGAAGGC CAACTCCGAA GGCCAGCCGG GGCCCCAGGA TTACGGCCGC 
ACGCACGCCG ACGGGGCCAA CATGCTGGCC GAAGCGCTCG CGCCCTACGG CGGCGTGGTC 
ATGTGGCGGG CGTTCGTCTA CGCACCGGAG GCCGAAGACC GGGTCAAGCA GGCCTACGAC 
GAATTTGTGC CGCTGGACGG ACAGTTTCGC GAAAACGTAC TGATTCAGGT CAAAAACGGG 
CCGCTCGATT TCCAGCCGCG CGAGCCGTTT CATCCGCTTT TCGGCGCCAT GCCGCGGACG 
CCGCTCATGA TGGAATTCCA GATCACCAAA GAATACCTGG GCTTCTCGAC GCACCTGGCC 
TATCTGGGAA CGCTGTGGGA AGAGGTCCTG CAGGCCGACA CGTACGCCCG GGGCGAGGGC 
TCGACGGTGG CCCGCGTGAT CGACGGCAGC CTCTTCGGCC GCGAGCTGAC CGGCATGGCC 
GGCGTGGCCA ACATCGGCAC CGACCGCAAC TGGTGCGGCA GCATCTTCGA TCAGGCCAAC 
TGGTATGCCT TCGGGCGCCT GGCGTGGAAT CCGGACCTGC GGGCCGACTC GATTGCCGAG 
GAGTGGATCC GCATGACCTT CACGAACGAC CCGCGCTTCG TCGCACCGGT CAAACAGATG 
ATGCTTGAGT CGCGCGAGGC CGTCGTCAAC TACATGACGC CGCTTGGACT GGCCCACCTG 
ATGGGTCCCG GCCACCATTA CGGCCCGGCG CCCTGGTTCG ATCAGGCGCC ACGTCCCGAC 
TGGAACAACA CCTATTACCA CCGGGCCGAC ACGCTGGGGA TCGGCTTCGA CCGGACGGCA 
ACAGGCAGCA ACGCGGTGGC CCAGTACTTT TCACCCCTGC GGGAAATTTT TGGCAGCCTG 
GAGCGCTGTC CGGAAAAATA TCTGCTGTGG TTTCATCACG TACCGTGGGA CTACCGAATG 
CGCTCCGGTC GCACGCTCTG GGAGGAGCTG GTCGATCACT ACTACCAGGG CGTCGAGACG 
GTCCGGCGCT GGCAGTCGCT CTGGAAGTCG CTCCGGGCGT TTGTCGATCC GGAGCGCTTC 
GAGCAGATCG CCACGTTTCT GCGCATTCAG GAAAAAGAAG CCGTCTGGTG GCGCGATGCC 
TGCGTGCTGT ATTTCCAGAC GTTCAGCCGG CGCCCGATTC CGGCCGGCTA CGAGCAGCCC 
GCCCACACGC TGGACTACTA CATCGAACTG CAACGCAAAC TTCAACGATT CCCCATGCCG 
GGGCACTGGG TCGGACGATA G 

 

Protein sequence

MHRLILWILL LAGIGFWSRP GVAEDGYQLW LRYVRIEDEA LRQRYLQQFR ALHLEATSPT 
LEIVQEELRR GLQGLLGTSI PSVDRVEEGV LLVGTPASCP TVAALGLEAE LQALGDEGFL 
LRTMTVEGHR ATVLAAASDV GVLYGAFHLL RLLQTHRPID SLNVREAPRV RLRVLNHWDN 
LDRTVERGYA GFSLWDWFKL PDYIDPRYRD YARANASLGI NGTVLTNVNA DARVLLPEFL 
EKVAALADIF RPYGIRVYLT ARFSAPIEIG GLDTADPLDP DVRAWWREKV AEIYRYIPDF 
GGFLVKANSE GQPGPQDYGR THADGANMLA EALAPYGGVV MWRAFVYAPE AEDRVKQAYD 
EFVPLDGQFR ENVLIQVKNG PLDFQPREPF HPLFGAMPRT PLMMEFQITK EYLGFSTHLA 
YLGTLWEEVL QADTYARGEG STVARVIDGS LFGRELTGMA GVANIGTDRN WCGSIFDQAN 
WYAFGRLAWN PDLRADSIAE EWIRMTFTND PRFVAPVKQM MLESREAVVN YMTPLGLAHL 
MGPGHHYGPA PWFDQAPRPD WNNTYYHRAD TLGIGFDRTA TGSNAVAQYF SPLREIFGSL 
ERCPEKYLLW FHHVPWDYRM RSGRTLWEEL VDHYYQGVET VRRWQSLWKS LRAFVDPERF 
EQIATFLRIQ EKEAVWWRDA CVLYFQTFSR RPIPAGYEQP AHTLDYYIEL QRKLQRFPMP 
GHWVGR