Gene Rmar_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1076 
Symbol 
ID8567717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1238222 
End bp1239265 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content70% 
IMG OID 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003290356 
Protein GI268316637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAAG GCATCGACTG GGATCTTCTG GCTAAATACA TCGCGGGCGC CTGTTCGGAA 
GCCGAGCGGG CGGCCGTGGA AGCCTGGGCA TCGGCCGACC CGATGCATCG CCAGCTGCTG
GAAGAGCTGA GGCTGACCTG GCAGGTGATG GAGCAGATGC CCCCGCCGGT TTCGGTGGAG
GCAGCCTGGC AACGCGTGCG GGCGCAGATG GAAAGGCCCG CCGATCGTCC GGCCATCCCT
GCACGGCGGC ATCGGGCCAG AGCATGGGGG GTACGGGTGC TGGCCGTGCT GGCGGTGACG
CTCGGGGTTG CGCTGCTGTA CCACGAGCTG GGGTGGCTTC CGCGGCCGGA GTCGGCCCAC
GAGCCCGAGG CTCCCCGGGT TTTTGTCACG CAGCGAGGAC AGCGCGCCAC CGTGCAGCTG
GTCGACGGCA CGCGCATTCT GCTGGCGCCC GAGTCGCGGC TTGAGGTGGC GGCCGATTAC
GGTCGGACCG GGCGGCACGT AACGCTGGCC GGCGAGGCCT ATTTCGAGGT GGCGTCCGAC
TCGCTGCATC CCTTTGTGGT GCAGGCGCCC CGGCTGCGTG TGCAGGTGCT CGGGACGGCT
TTCGGCGTGC GTGCCTACGC CGAAGAAACC CGGGCCTATG TGGCCGTGCG CCATGGTCGG
GTGCAGGTGC AGCCCGAGTC GGCTCACGCC AGGGCAGCGG CCGCGCTGCT GGCGGCCGGC
CAGGTGGCCC GGTTGAAGGA AGCCGGGCAG CTTGAAATAA GGCGGCCGGC CAGCCTGGAC
GCCTACGTGG GATGGGCCGA AGGGCGCCTG GTGTTCGAGC GAACCCCGCT GCGCGAAGTG
GCCCGCACGC TGGCGCGCTG GTACGATCTG GAGATCCAGC TCGAGGATCC GGCGCTGGGG
GCGCGGCAGC TGACGGCCAC CTTCGAGGAA GCTCCGGCCT ACCAGGTCCT GCAGATCATT
GCGGCCACCA TGAACCTGGA GGTCGTGCGA GACGCCGAAA ACCCCCGGCG AATCCGCTGG
CGGGAGGCTT CACCGCCATC CTGA
 
Protein sequence
MHEGIDWDLL AKYIAGACSE AERAAVEAWA SADPMHRQLL EELRLTWQVM EQMPPPVSVE 
AAWQRVRAQM ERPADRPAIP ARRHRARAWG VRVLAVLAVT LGVALLYHEL GWLPRPESAH
EPEAPRVFVT QRGQRATVQL VDGTRILLAP ESRLEVAADY GRTGRHVTLA GEAYFEVASD
SLHPFVVQAP RLRVQVLGTA FGVRAYAEET RAYVAVRHGR VQVQPESAHA RAAAALLAAG
QVARLKEAGQ LEIRRPASLD AYVGWAEGRL VFERTPLREV ARTLARWYDL EIQLEDPALG
ARQLTATFEE APAYQVLQII AATMNLEVVR DAENPRRIRW REASPPS