Gene Rmar_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1029 
Symbol 
ID8567670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp1178815 
End bp1179354 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content68% 
IMG OID 
Product16S rRNA processing protein RimM 
Protein accessionYP_003290310 
Protein GI268316591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.635977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGGG TAGATCCGGA CGAGTTGCTG CTGATGGGCT ATGTGGCCCG GGCGCATGGT 
GTCCGGGGTG CCTTCAAGGT GGTTCCCGAA ACGGACGATC CCACGCGCTT TGAAACGCTG 
GAGACGATCT ACGTCGGGCG TTCGCCGGAG ACGGCCCGCC CGGTGCGCCT GGAGCGCGTG 
CAGTACCAGC CCACGCGGCG CGGGCTGATC GTGCTGCTGC AGGTGGCCGA GGTCACCGAC 
CGCGACGCGG CGCAGGCGCT CCGGGGCCTG CGGGTTTACG CCCGGCGGTC CGACCTGCCC 
CCGCTGGCCG AAGGGGAATT CTTCCTGCAC GATCTGATCG GGTTGCGGGT GGAGACCGAA 
GCGGGCGAGA CCGTCGGTAC CGTCATCGAA GTGCTGGAGA TGCCCGCCCA CCTGATCTAT 
GTGGTGGGCC GTCCGGGCCG TCCGCATGCG ATGGTGCCGG ACGTCGAGGT CTTCGTGCGG 
GAGCTGGACC TTGAAGGCCG GCGGCTCGTT ATACGCCCGA TCGAAGGGTT GCTGGACTGA
 
Protein sequence
MERVDPDELL LMGYVARAHG VRGAFKVVPE TDDPTRFETL ETIYVGRSPE TARPVRLERV 
QYQPTRRGLI VLLQVAEVTD RDAAQALRGL RVYARRSDLP PLAEGEFFLH DLIGLRVETE 
AGETVGTVIE VLEMPAHLIY VVGRPGRPHA MVPDVEVFVR ELDLEGRRLV IRPIEGLLD