Gene Rmar_1024 details

Gene Information

• Locus tag: Rmar_1024
• ID: 8567665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1174828
• End bp: 1175529
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 62%
• Product: phage shock protein C, PspC
• Protein accession: YP_003290305
• Protein GI: 268316586

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTTAG AAGCCGAAGA GGCGGAGGCG CTGGAGCTGG AGCAGCTCTC CGATGCCGAA 
CTGGAGCAAC TGCTGTTCGG AGACGAAAGC GGCGCCACGC GTCGGGATTC GGTGTGGAAT 
CTGCCCACGG TGGCCGGACT GGCCATGCTG CTGGTGGGTG TGGTGTACGT GCTGCAGCAG 
ATGGGGCTCT GGAGCGGCGT GGACGTAAGC ACGCTGGTGG GCTTTCTGCC CTGGGTGGCC 
GCATTGCTGA TCATCCTGCT GGGACTGGGC GTGCTTTCCT GGCGGCCGCG CCGGCGTCCA 
CGCCCGCGCA AAAAAGCCAG GCCCAGGCAG CAAAAATCGC TGGACGAGTT GTTCGATCAG 
CCCCGGAAGG TTTTCGAAGA GCTGCGCACC ACGTTTTCTT CCGGTAAGTC CACTACAGCT 
CAGACGACCA CCGAAGCCAC CACCACTTCG CCAGCGGAAA CGAAGTCCAA ACGCCTGGTC 
AAGTCGCGCG ACCGGATGCT GGCGGGCGTC TGCGGCGGCA TTGCCGAATA CCTCGGATGG 
GATCCCACCC TGATCCGGGC GCTTTTCGTG CTAGGCGCCA TCTTTTCCAG TGGCTTCCCC 
TTCATCATCG TGTATCTGAT CCTGGCCTGG ATCATGCCCG AGCCGGACCC GCTTGAAAAA 
TCGAAGGACG ACGAGCCGCG CATTACCATT TTGCCGGAGT AA 

 

Protein sequence

MHLEAEEAEA LELEQLSDAE LEQLLFGDES GATRRDSVWN LPTVAGLAML LVGVVYVLQQ 
MGLWSGVDVS TLVGFLPWVA ALLIILLGLG VLSWRPRRRP RPRKKARPRQ QKSLDELFDQ 
PRKVFEELRT TFSSGKSTTA QTTTEATTTS PAETKSKRLV KSRDRMLAGV CGGIAEYLGW 
DPTLIRALFV LGAIFSSGFP FIIVYLILAW IMPEPDPLEK SKDDEPRITI LPE