| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1008 |
|---|
| Symbol | |
|---|
| ID | 8567648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1156446 |
|---|
| End bp | 1157222 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_003290290 |
|---|
| Protein GI | 268316571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.649476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCC GGATCAAAGG AGGATGGCGG GCTCCACGAC CGGCGCCCGT TGCTGAGAAG
GCGCCAGCAG ACGAACAGCC GACGCTTCGC CGGCGAGCGC CTTACAAAGT ACCTGAAGCC
GACCTGCGTC AATACTACCG GCTGTTAATC ATGCTGGGAC TGGCGCTGGC GCTGGCCCTG
CTGATCGTGC TATTTAGAAT TCCATGGCGG CCGAAGACGG AGGTAGCCCT GGCCGTTACC
GAGCAGGAAG TGGTGCAGCT GGAGGAGATC GTGCAGACGC GTCAGGAGCT ACCACCGCCT
CCGCTACCAC GTCCAACCGT TCCCGTAGCA GTGCCCGACG AGACGATTCT GGAAGAGGAG
CCGGTGAGTT TTGACGTCTC GCTGGATATC AACGAAGCAA TCACTGAATT GCCACCGCCT
CCGCCCCCTC CAGAGCCCGA ACAGGAAGCG CAGCCCGAAG AAGAGCAGGA GATCTTCGTT
GTGGTGGAGG AGATGCCGGA AATTATTGGT GGAATTGAAC GACTCTACGA ACTGCTGGAG
TACCCCGAGC TGGCCCGTAA AGCAGGCATG GAGGGGTTGG TGGTTGTGCA ATTCGTGGTG
GAACCCGACG GGAGCGTGAG CAATGTGCAG GTGATTCGTT CGGCCGGTCG ACTGTTGGAC
GAGGCGGCCA TCAGGGCGGT GAAACAGCTG CGGTTCAAGC CCGGACGGCA GCGCGGGCGT
CCGGTCCGGG TTCGGTTTTC GCTGCCCATT CGGTTTAAGC TGCAGTCATC CCAGTAG
|
|---|
| Protein sequence | MTARIKGGWR APRPAPVAEK APADEQPTLR RRAPYKVPEA DLRQYYRLLI MLGLALALAL
LIVLFRIPWR PKTEVALAVT EQEVVQLEEI VQTRQELPPP PLPRPTVPVA VPDETILEEE
PVSFDVSLDI NEAITELPPP PPPPEPEQEA QPEEEQEIFV VVEEMPEIIG GIERLYELLE
YPELARKAGM EGLVVVQFVV EPDGSVSNVQ VIRSAGRLLD EAAIRAVKQL RFKPGRQRGR
PVRVRFSLPI RFKLQSSQ
|
|---|
| |