| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1007 |
|---|
| Symbol | |
|---|
| ID | 8567647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1155449 |
|---|
| End bp | 1156411 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_003290289 |
|---|
| Protein GI | 268316570 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGA TTCGCCGCAT TCTGTTTGCT GATGATTTTT CGGAGTGTGC AGAAAAGGCA
CTCCCTATTG CACTGGCGCT GGCTCAGGAA CATGAAGCCG AGCTGCATCT GCTGCATGTG
GTCGTGCCGT ATGAAGATGC ACGCGGGCTT TCGGCGCTAA GTGAGGAGCA GGAGGCGCAG
CTCAAACAGC AAATGCAGGA GCGGCTGGCT GCTATCCGAA AAGCGCAGCC CCGGGCAGCG
GCTGGTGCAT TGAAAACCGT GGTAGCGATC GAGCGAGATC TGGCACCGGC GCTTGGTATC
CTGGGCTATG CAGAGGATCA CGATATCGAT GTGATCGTGA TGGGTACACA CGGACGCCGG
GGATTCCGGC ACTTCTTAAT GGGGAGCGTG GCCGAAGAAG TGGTGCGGCT GGCTCATTGC
CCGGTGATCA CCACGCGGCA GCAGGTGGAT CCCTGGCACG TGCACCCGCC TCGCCGGATT
CTGGTACCGG TGGATTTCTC CGAGCACAGC CGGACCGCCC TTCGCTACGG GCGCGAGCTG
GCAGCAGCCT TCGGTGGGCA TCTTACCGTC CTGTACGTCA TCGAAGAGAT TTTGCATCCA
GCCTTCTACA ACACGGGCGT CTTTTCAATC TATGATGTGA TGCCCGATAT CGAAGAGCGT
TCAAAGAAGG CGCTGGAAGA GTTCGTGGTG CGTACTGATG GACCGGACGT GCCGGTGAAT
TATCGGGTGG TGCATGGCCG GGCCGTGCGA GAGATCCTGC ATGAGGCAGA GCGTGAACCG
GCCGATCTGA TCGTTATGGC CACCCATGGA TTGACCGGGC TGCAGCACCT GCTGCTGGGT
AGCGTGACCG AGCGGGTTAT CCGACAGGCG CCCTGTCCGG TGTTTGTTGT GAAAGTCTTT
GGGAAGTCGC TGTTGCGACC GACTGAGGCC GAAGCTTCCC AAAAAGTGAA CACCTCGACC
TGA
|
|---|
| Protein sequence | MLKIRRILFA DDFSECAEKA LPIALALAQE HEAELHLLHV VVPYEDARGL SALSEEQEAQ
LKQQMQERLA AIRKAQPRAA AGALKTVVAI ERDLAPALGI LGYAEDHDID VIVMGTHGRR
GFRHFLMGSV AEEVVRLAHC PVITTRQQVD PWHVHPPRRI LVPVDFSEHS RTALRYGREL
AAAFGGHLTV LYVIEEILHP AFYNTGVFSI YDVMPDIEER SKKALEEFVV RTDGPDVPVN
YRVVHGRAVR EILHEAEREP ADLIVMATHG LTGLQHLLLG SVTERVIRQA PCPVFVVKVF
GKSLLRPTEA EASQKVNTST
|
|---|
| |