| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0980 |
|---|
| Symbol | |
|---|
| ID | 8567620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1114992 |
|---|
| End bp | 1116362 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Alpha,alpha-trehalose-phosphate synthase (UDP- forming) |
|---|
| Protein accession | YP_003290262 |
|---|
| Protein GI | 268316543 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.43099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATCATTG CGGCCAACCG GGCCCCGCTG CGCTACACCG AGGACGAAGG CTGGGTCCCG
GCCATTGGAG GATTGGCCAC CGCCCTGTTA CCCGTGCTGC AGGAGCAGGG GGGCGTCTGG
ATTGCCATGC AGGAAGACGC AAAGGCGCCG ACGCGCCAAC CCTACCCGCC CGAGGCGCCC
GACCTGGAAA TCCAGCGGAT CCCGCTCAGT GCGCAGGAGC GCACGCACTA CTACTTGGGG
ATGTCCAACC GGGTGCTCTG GCCCATCTGC CACTACATGC TGCAGCATCT GGAGCTGGAG
CGGGCCTACA TGGAGGCCTA CCGCACGGTC AACCGGCGCT TTGCCGAGGC CATCGTACGC
GCCTACCGTC CGGGCGATTT CATCTGGGTG CACGACTATC ACCTGATGCT GGTGCCCCAC
CTGATACGCC AGGCCATTCC CGACGCGAAC ATCTCGTTCT TCTGGCACAT TCCCTGGCCG
GCCATGGAGG TCTATCGCAT CCTGCCCTGG TCGCGGGAGC TGCTGCAGGG TATGCTGGGA
TGCGATCTGA TCGGCTTTCA CGTCGAGGAA TATGTCGAAA ACTTTCTGGA AAGCGCGCGC
TACCTGCTCG GCGCCGAAAT CGAAGACAAC CGGGTGCTCT GGGAGGGGCG TGAGGTGCGC
GTCGAGGCGC ATCCGATCGG CATCGACGTC GCCCGATTCG AACAGCTCTC GGAGCGGGAG
GACGTGCGTC GCGAGGCCGA ACGGCTTCGG GAAGAAATGC ATGCCGAGTG GCTGCTCATC
GGTATCGATC GGCTCGATTA CACGAAGGGA ATTCTTTCGC GACTGCAGGC CTTCGAGCAG
TTTCTGAAGG AGTATCCGGC GTATCACGGC CGCGTCACGT TCTATCAGGT CGCCACGCCG
AGCCGCACGC AACTGGAGTC CTACCAGCAG TTGAAACGCG AGGTGGACGA GGCCGTGGGG
CGCATCAACG GTTTTTTTGC GCGTGATAGC TGGGTGCCCG TGCACTACCG CTATCGCACC
TATACGCAGG AGGAACTCTG CGTCTTTTAC CGGGCGGCCG ATGTGGCGTT GATTACGCCG
CTGCGCGACG GGATGAACCT GGTCACGCAG GAGTTCATTG CGGCCAGTCG GAGTGGCGTG
CTGGTGCTCT CGGAGTTGAC CGGCGCTGCG CATCTGCTGC GGGAGGCCGT GCTGGTCAAC
CCCTACGACC GGGACGGCAT GGTGCAGGCC ATCCGGACGG CCCTGGAGAT GCCGGTCGAG
GAGCGGATCG AGCGGTTTCG CTTTCTGAAG CGAACCGTGC GCGAACTGGA CGTGCACCGC
TGGGCCCGCC GGTTCCTCGA AGCCATGCAG CAACGCCCTT CGGAAGTCTG A
|
|---|
| Protein sequence | MIIAANRAPL RYTEDEGWVP AIGGLATALL PVLQEQGGVW IAMQEDAKAP TRQPYPPEAP
DLEIQRIPLS AQERTHYYLG MSNRVLWPIC HYMLQHLELE RAYMEAYRTV NRRFAEAIVR
AYRPGDFIWV HDYHLMLVPH LIRQAIPDAN ISFFWHIPWP AMEVYRILPW SRELLQGMLG
CDLIGFHVEE YVENFLESAR YLLGAEIEDN RVLWEGREVR VEAHPIGIDV ARFEQLSERE
DVRREAERLR EEMHAEWLLI GIDRLDYTKG ILSRLQAFEQ FLKEYPAYHG RVTFYQVATP
SRTQLESYQQ LKREVDEAVG RINGFFARDS WVPVHYRYRT YTQEELCVFY RAADVALITP
LRDGMNLVTQ EFIAASRSGV LVLSELTGAA HLLREAVLVN PYDRDGMVQA IRTALEMPVE
ERIERFRFLK RTVRELDVHR WARRFLEAMQ QRPSEV
|
|---|
| |