Gene Rmar_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0977 
Symbol 
ID8567617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1109782 
End bp1111641 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content67% 
IMG OID 
ProductDNA primase 
Protein accessionYP_003290259 
Protein GI268316540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCC CCGAGGAAAC CATCGAAGCC ATTCGCACAG CCGTCGACAT CGTCGAGGTT 
GTGGGCGAGT ACGTCTCGCT GCGCCGCCGG GGGGCCAACT GGTTCGGGCT GTGCCCCTTC
CACGAAGAAA AAACGCCTTC CTTCAGCGTC AATCCGCATC TGGGCATTTT CAAGTGCTTC
GGCTGTGGGC GCGGGGGCGA CGTGTTCGCC TTCATCCAGC AGATCGAGCA CGTCAGCTTT
GTGGAAGCCG TGCGGATGCT GGCCGAACGC GCCGGCATTC CGCTCCCCGA CGGCGAGGAG
GAGGCCGACG ATCCGCGCCC GGCCCTGTAC CATGCATTGC GCTTTGCGGC CCGATTCTAT
TTTGAACAGC TGACGCAATC GGAAGCCGGA CAGGTGGCCC GCGCCTACCT GAAACAACGC
GGCATTCATC CGGAAGCCGT CCGCCGTTTC GGGCTGGGCT ATGCGCCCAA TGCCTGGGAT
GCGTTGCTGA AGGCCGCCAC CGAGGCGGGC ATTCGTCCCG AGGTGCTCGA ACAGGCCGGG
CTGGTGCTTC CGCGCAAGGA GCGGGGCGGC TACTACGACC GCTTTCGCCA CCGCCTCATG
TTTCCGATCT TTTCGCACAC GGGCCGCGTG GTGGGCTTTG GCGGACGCCT GCTGGAGCCC
GATCCCGAGC AGCCCAAGTA CATCAACACG CCCGAAACGC CCGTCTATCA CAAGGGGCGC
ATCCTCTACG GGCTCTACCA GGCCCGCCAG GCCCTGCGCA CCCAGGAAGA AGCCATCCTG
GTGGAGGGCT ACACCGACGT CATTGCGCTG CATCAGGCCG GCATCGAGCA CGTGGTGGCC
ACCAGCGGCA CGGCGCTCAC ACCCGATCAG GCGCGGCTGC TGGCGCGCTA CGTCCGGCGC
GTGGTGCTGC TTTTCGACGC CGACGCGGCT GGCCAGCAGG CGGCGCTGCG CAGCATCGAA
CTGTTTCTGG AGCGCGGGCT GAACGTCTAC GTCGTGTCGC TACCCCCTGG CGAGGATCCC
GATTCGTTCG TGCGGGCCAA GGGTGCCCGG GCCTTTCAGG AATACCTACG GCAGCGTCGC
CGCGACTTCG TCACCTTCCA TTACGAGCTG GCCCGCCGCC AGGGACGGCT CGACACGCCC
GAGGGCGAGG CCGAAGTGGC CCGCACCATC GTGAGCGCCA TTGCACGCCT GCCCGACCCG
CTGCTGCGCG AACCCTACGT GCGCCGCGCG GCCGAGCTGC TCCGCATCCA GCAGGTTCGC
CTGCTGGAGA TCCTGGAGGC TCAGCTCACC CCTTCTTCCC GCGAGGCGCC GCCGCCCGCT
CCGTCGCCCT CCACTCCGCC GCCTACTTCG CCGACGTGGC ACGAAGCCGA ACGCCTGCTC
GTGCGTCTGA TGCTGGAAGA AGGCCGGCCG ATGGTCGCCT TCGTACTGGG TCACATGGCC
CTGGAGGAGT TCACCGAAGG TCCGCCCCGT CAGCTCATCG CCCGACTGCT GGAGCAGTAC
GAAGCCGGCG CCGTCGATGC CCGGCCTTTT CTGGAGGGAC GCTACGGCCC TGAAGTGCAG
CGCCTGACCG TCGAGGCGCT CATGGAGCCC TACGAGCCCT CCGAGAACTG GGAACGCAAA
GGCATTTCGG TTCCCCGCCT GCGCGACCGG GCCTACGAGG CGGCGGCCGA CGCCATGGTG
CGCCTCAAGC TGCAGCGCAT CGACGAGATG ATCCACCGGC TCAAAGAGGA GCAATTGCGC
ACCCGCCACG ATGAAGCGCG CGTGCGCGAA ATCATTGCCC GGCTGAACCA TATCCTGCAA
CTCCGCCGCC AGATCGAACG CCGCGCCTTT CTCAATCCGG AGCTGCTACC CCGCAACTGA
 
Protein sequence
MRIPEETIEA IRTAVDIVEV VGEYVSLRRR GANWFGLCPF HEEKTPSFSV NPHLGIFKCF 
GCGRGGDVFA FIQQIEHVSF VEAVRMLAER AGIPLPDGEE EADDPRPALY HALRFAARFY
FEQLTQSEAG QVARAYLKQR GIHPEAVRRF GLGYAPNAWD ALLKAATEAG IRPEVLEQAG
LVLPRKERGG YYDRFRHRLM FPIFSHTGRV VGFGGRLLEP DPEQPKYINT PETPVYHKGR
ILYGLYQARQ ALRTQEEAIL VEGYTDVIAL HQAGIEHVVA TSGTALTPDQ ARLLARYVRR
VVLLFDADAA GQQAALRSIE LFLERGLNVY VVSLPPGEDP DSFVRAKGAR AFQEYLRQRR
RDFVTFHYEL ARRQGRLDTP EGEAEVARTI VSAIARLPDP LLREPYVRRA AELLRIQQVR
LLEILEAQLT PSSREAPPPA PSPSTPPPTS PTWHEAERLL VRLMLEEGRP MVAFVLGHMA
LEEFTEGPPR QLIARLLEQY EAGAVDARPF LEGRYGPEVQ RLTVEALMEP YEPSENWERK
GISVPRLRDR AYEAAADAMV RLKLQRIDEM IHRLKEEQLR TRHDEARVRE IIARLNHILQ
LRRQIERRAF LNPELLPRN