Gene Rmar_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0976 
Symbol 
ID8567616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1107084 
End bp1109618 
Gene Length2535 bp 
Protein Length844 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003290258 
Protein GI268316539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.495512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGGC TACTCCTTAC GGCCGGATCG ATCCTGCTCC TGCTTCCGGC CTCGCAAGCC 
CAGAACGCCT GGATCAACGA GTTCCACTAC GACAACGCCA GTACCGATGA AAAGGAATTC
GTCGAAATTG TCCTCGAAAA TGCCGGATCG TTCAATCTGA GCGATTTTAC GCTGGTCCTC
TACAACGGCG CCAACGGTGA GGCCTACGGC ACCCACACGC TCGACACCTT CACCGAAGGG
GTGACCGATG GCAATTACAC GCTCTACTAC AAGTACATCG AGAGCATTCA GAACGGCACG
CCGGACGGGC TGGCGCTCTG CTACCAGGAC AACGTGATCC AGTTTATCAG CTACGAGGGC
ACCTTCACCG CCACCGACGG CTGCGCCGCC GGCACCACTT CAACCGACAT CGGCGTCGCC
GAAGATGGGA CGGGTTCCTC ATCTGAATCA TTGCAACTGA TTGGCTCTGG CTCGGAATAC
GATGAGTTTT TAGGATGGTT TATCGCAACC GCTTCGCCGG GCGATCCGAA CGACCCGATG
CAGACGCTGA TCAGCCGCCC GGTGGTCAAC GAAACGAAAG GGTTGAGCTA CCACACGATT
CAGGAAGCCA TCGACAATGC CGATCCGGGC GATGAGATCA CACTGGCTCC GGGTGTTTAT
ACCGAATCCA TCACCATCGA CCGTCCCATT TCCCTGATCG GTATGCTGGA AGATTGGCTG
GCCAAACGCG CGCGCAGCCG CCCGGCGCCT CGCCGCACGC AGAGCGTCGG CTGCAGCCTG
CCCGTGGTGA TCGACGTCTC GGGCAATGCC ATCGGCATCA ATATCACAGC CAGCAATGTG
TATCTGGCCG ACTTTTGCAT CACCGGAGCT ACCAACGCCA ACCTCTACAC GAACTCGGTG
ATCTCCAACC TGACCCTTAG CAACATTGAA TCGGTCAACG CCGGTCTCTA CGGGCATGGG
CTGGATCTTC ACAACGACGC GGTCGTCACC ACGCTGAATA TTTCTACCTC CTATTTTGCC
GGCAACTTCA TCGGCATTCG CATCCGGGGC TCGCTCGATG GTGGCGAAAT CAACGGCTCG
CTCTTCGAAC AGAACCGACA CAGCGGCCTG TACACCACCC ACGGGAGCGA TGCCACGGGT
AGTACCTATG TACGGTACCT GAACATCTTT AACACGGATT TTTACGACAA CCCCTGCAAG
GCCGTCTATG CCGAGAAGCT CTCCCACACG CACTTTCTGA ACGTAGAAGT CCGGAACAGC
GGAACGGCCG CCGATGCCGA CTGTGCCTAT CCCGAAGCTA TTGACATCAA CCTGAAATAT
GGCGGTTACG AGCGGCTGCG TTTCGAACGC GTGACGGTTA CCGGTTCCAT CGGTGAAGGG
TTGCACATCA AGGGCCGCGC CGATTACGGA AATGCCTCGG TGGACGACGT GGTGATCCAG
GATAGCTACT TTGAAAGCAA CAGCATCGGC GTGGCCATCG GGGGCAATGT GGGACAGAGC
CGGGGACTTT CGATCGTGAG CAGTGCCATC GTCAACAACG GCAACGAACC GGACCGCTAC
CTCTACAAAG ACAACACGCC CACCAGTTAC GCTACCCGGG GTGGCGTGCT GATCTACGAC
GTGCCGGATG ACGCCTGGAT CGATGTCGGG TACAACTGTA TCGTTAACAA CGGCACGGTC
GAATACAACG GCACCTATGG CTTCGGCCTG GCCAATGTCA GTGATGCCAC GGTGGAGGCG
GTGAATGTCT GGTGGGGCCA GCCTACGGGC CCCGTGTTCT TCACGGGTAC GTTTACGGAA
GGCAACTATG TGTTCGGCAA TGTCGTGACC AGCCCCTACG CCACCGAACC CCATGCCGAC
ATCGAGGGCT GTGGTGGCCC CACAGGCACC TGCACGCTGG CCACGCTGGG CACGCTCCAG
AAGCTGAACT CCAGCACCGG GCGAGCACAG ATTCTGGGAC CGGACGGCAT TCTGGTAGTA
CAGAACAGCC CGCTCCAGCC GAACGTCAAC CTGCAGCTCG TAGGTGTGAC GGACGGTGAC
GGCAATTCGG TCTTTACCGA GACCTCGCCG GGCGTCTGGG AATACACGGG CGGAGGCCAG
CCACCTACCG AAGCCTGGGC CTACTATCAG CGGATCGACA CGAACGACCC CACCAATCAG
TTCTTCCTGC AGGTGTCCAC GGTCTGTCCC TCCGAGCCAG ACGGCACGCT GGAGGCACAC
CTGGACCCGC ACTTCAGCTT CCAGGACGCG CTGCCCATGA CGTTCGCCGT CCACGGGGCC
GCTCCCAATC CCTTCCACAC CCGCGCGACG CTTGCCGTCG AACTACCGCA GGCAGCCCGG
GTGACGGCCC GCGTGTTCGA TCTGCTGGGA CGTGAGGTGG CTCGAATCAC CGACAGGGAA
CTGCCGGCCG GCACACATCG GCTCGTATGG GAGCCGAACG GCCTCTCGGG CGGCACCTAC
CTGCTGCGCC TGGAAGTCCG CGAAGCCGAC GGCACCTACC ACCGGCATAC GCAACTGCTG
ACGTTCGTTC GGTAA
 
Protein sequence
MRRLLLTAGS ILLLLPASQA QNAWINEFHY DNASTDEKEF VEIVLENAGS FNLSDFTLVL 
YNGANGEAYG THTLDTFTEG VTDGNYTLYY KYIESIQNGT PDGLALCYQD NVIQFISYEG
TFTATDGCAA GTTSTDIGVA EDGTGSSSES LQLIGSGSEY DEFLGWFIAT ASPGDPNDPM
QTLISRPVVN ETKGLSYHTI QEAIDNADPG DEITLAPGVY TESITIDRPI SLIGMLEDWL
AKRARSRPAP RRTQSVGCSL PVVIDVSGNA IGINITASNV YLADFCITGA TNANLYTNSV
ISNLTLSNIE SVNAGLYGHG LDLHNDAVVT TLNISTSYFA GNFIGIRIRG SLDGGEINGS
LFEQNRHSGL YTTHGSDATG STYVRYLNIF NTDFYDNPCK AVYAEKLSHT HFLNVEVRNS
GTAADADCAY PEAIDINLKY GGYERLRFER VTVTGSIGEG LHIKGRADYG NASVDDVVIQ
DSYFESNSIG VAIGGNVGQS RGLSIVSSAI VNNGNEPDRY LYKDNTPTSY ATRGGVLIYD
VPDDAWIDVG YNCIVNNGTV EYNGTYGFGL ANVSDATVEA VNVWWGQPTG PVFFTGTFTE
GNYVFGNVVT SPYATEPHAD IEGCGGPTGT CTLATLGTLQ KLNSSTGRAQ ILGPDGILVV
QNSPLQPNVN LQLVGVTDGD GNSVFTETSP GVWEYTGGGQ PPTEAWAYYQ RIDTNDPTNQ
FFLQVSTVCP SEPDGTLEAH LDPHFSFQDA LPMTFAVHGA APNPFHTRAT LAVELPQAAR
VTARVFDLLG REVARITDRE LPAGTHRLVW EPNGLSGGTY LLRLEVREAD GTYHRHTQLL
TFVR