Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0976 |
Symbol | |
ID | 8567616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1107084 |
End bp | 1109618 |
Gene Length | 2535 bp |
Protein Length | 844 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003290258 |
Protein GI | 268316539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.495512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGGC TACTCCTTAC GGCCGGATCG ATCCTGCTCC TGCTTCCGGC CTCGCAAGCC CAGAACGCCT GGATCAACGA GTTCCACTAC GACAACGCCA GTACCGATGA AAAGGAATTC GTCGAAATTG TCCTCGAAAA TGCCGGATCG TTCAATCTGA GCGATTTTAC GCTGGTCCTC TACAACGGCG CCAACGGTGA GGCCTACGGC ACCCACACGC TCGACACCTT CACCGAAGGG GTGACCGATG GCAATTACAC GCTCTACTAC AAGTACATCG AGAGCATTCA GAACGGCACG CCGGACGGGC TGGCGCTCTG CTACCAGGAC AACGTGATCC AGTTTATCAG CTACGAGGGC ACCTTCACCG CCACCGACGG CTGCGCCGCC GGCACCACTT CAACCGACAT CGGCGTCGCC GAAGATGGGA CGGGTTCCTC ATCTGAATCA TTGCAACTGA TTGGCTCTGG CTCGGAATAC GATGAGTTTT TAGGATGGTT TATCGCAACC GCTTCGCCGG GCGATCCGAA CGACCCGATG CAGACGCTGA TCAGCCGCCC GGTGGTCAAC GAAACGAAAG GGTTGAGCTA CCACACGATT CAGGAAGCCA TCGACAATGC CGATCCGGGC GATGAGATCA CACTGGCTCC GGGTGTTTAT ACCGAATCCA TCACCATCGA CCGTCCCATT TCCCTGATCG GTATGCTGGA AGATTGGCTG GCCAAACGCG CGCGCAGCCG CCCGGCGCCT CGCCGCACGC AGAGCGTCGG CTGCAGCCTG CCCGTGGTGA TCGACGTCTC GGGCAATGCC ATCGGCATCA ATATCACAGC CAGCAATGTG TATCTGGCCG ACTTTTGCAT CACCGGAGCT ACCAACGCCA ACCTCTACAC GAACTCGGTG ATCTCCAACC TGACCCTTAG CAACATTGAA TCGGTCAACG CCGGTCTCTA CGGGCATGGG CTGGATCTTC ACAACGACGC GGTCGTCACC ACGCTGAATA TTTCTACCTC CTATTTTGCC GGCAACTTCA TCGGCATTCG CATCCGGGGC TCGCTCGATG GTGGCGAAAT CAACGGCTCG CTCTTCGAAC AGAACCGACA CAGCGGCCTG TACACCACCC ACGGGAGCGA TGCCACGGGT AGTACCTATG TACGGTACCT GAACATCTTT AACACGGATT TTTACGACAA CCCCTGCAAG GCCGTCTATG CCGAGAAGCT CTCCCACACG CACTTTCTGA ACGTAGAAGT CCGGAACAGC GGAACGGCCG CCGATGCCGA CTGTGCCTAT CCCGAAGCTA TTGACATCAA CCTGAAATAT GGCGGTTACG AGCGGCTGCG TTTCGAACGC GTGACGGTTA CCGGTTCCAT CGGTGAAGGG TTGCACATCA AGGGCCGCGC CGATTACGGA AATGCCTCGG TGGACGACGT GGTGATCCAG GATAGCTACT TTGAAAGCAA CAGCATCGGC GTGGCCATCG GGGGCAATGT GGGACAGAGC CGGGGACTTT CGATCGTGAG CAGTGCCATC GTCAACAACG GCAACGAACC GGACCGCTAC CTCTACAAAG ACAACACGCC CACCAGTTAC GCTACCCGGG GTGGCGTGCT GATCTACGAC GTGCCGGATG ACGCCTGGAT CGATGTCGGG TACAACTGTA TCGTTAACAA CGGCACGGTC GAATACAACG GCACCTATGG CTTCGGCCTG GCCAATGTCA GTGATGCCAC GGTGGAGGCG GTGAATGTCT GGTGGGGCCA GCCTACGGGC CCCGTGTTCT TCACGGGTAC GTTTACGGAA GGCAACTATG TGTTCGGCAA TGTCGTGACC AGCCCCTACG CCACCGAACC CCATGCCGAC ATCGAGGGCT GTGGTGGCCC CACAGGCACC TGCACGCTGG CCACGCTGGG CACGCTCCAG AAGCTGAACT CCAGCACCGG GCGAGCACAG ATTCTGGGAC CGGACGGCAT TCTGGTAGTA CAGAACAGCC CGCTCCAGCC GAACGTCAAC CTGCAGCTCG TAGGTGTGAC GGACGGTGAC GGCAATTCGG TCTTTACCGA GACCTCGCCG GGCGTCTGGG AATACACGGG CGGAGGCCAG CCACCTACCG AAGCCTGGGC CTACTATCAG CGGATCGACA CGAACGACCC CACCAATCAG TTCTTCCTGC AGGTGTCCAC GGTCTGTCCC TCCGAGCCAG ACGGCACGCT GGAGGCACAC CTGGACCCGC ACTTCAGCTT CCAGGACGCG CTGCCCATGA CGTTCGCCGT CCACGGGGCC GCTCCCAATC CCTTCCACAC CCGCGCGACG CTTGCCGTCG AACTACCGCA GGCAGCCCGG GTGACGGCCC GCGTGTTCGA TCTGCTGGGA CGTGAGGTGG CTCGAATCAC CGACAGGGAA CTGCCGGCCG GCACACATCG GCTCGTATGG GAGCCGAACG GCCTCTCGGG CGGCACCTAC CTGCTGCGCC TGGAAGTCCG CGAAGCCGAC GGCACCTACC ACCGGCATAC GCAACTGCTG ACGTTCGTTC GGTAA
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Protein sequence | MRRLLLTAGS ILLLLPASQA QNAWINEFHY DNASTDEKEF VEIVLENAGS FNLSDFTLVL YNGANGEAYG THTLDTFTEG VTDGNYTLYY KYIESIQNGT PDGLALCYQD NVIQFISYEG TFTATDGCAA GTTSTDIGVA EDGTGSSSES LQLIGSGSEY DEFLGWFIAT ASPGDPNDPM QTLISRPVVN ETKGLSYHTI QEAIDNADPG DEITLAPGVY TESITIDRPI SLIGMLEDWL AKRARSRPAP RRTQSVGCSL PVVIDVSGNA IGINITASNV YLADFCITGA TNANLYTNSV ISNLTLSNIE SVNAGLYGHG LDLHNDAVVT TLNISTSYFA GNFIGIRIRG SLDGGEINGS LFEQNRHSGL YTTHGSDATG STYVRYLNIF NTDFYDNPCK AVYAEKLSHT HFLNVEVRNS GTAADADCAY PEAIDINLKY GGYERLRFER VTVTGSIGEG LHIKGRADYG NASVDDVVIQ DSYFESNSIG VAIGGNVGQS RGLSIVSSAI VNNGNEPDRY LYKDNTPTSY ATRGGVLIYD VPDDAWIDVG YNCIVNNGTV EYNGTYGFGL ANVSDATVEA VNVWWGQPTG PVFFTGTFTE GNYVFGNVVT SPYATEPHAD IEGCGGPTGT CTLATLGTLQ KLNSSTGRAQ ILGPDGILVV QNSPLQPNVN LQLVGVTDGD GNSVFTETSP GVWEYTGGGQ PPTEAWAYYQ RIDTNDPTNQ FFLQVSTVCP SEPDGTLEAH LDPHFSFQDA LPMTFAVHGA APNPFHTRAT LAVELPQAAR VTARVFDLLG REVARITDRE LPAGTHRLVW EPNGLSGGTY LLRLEVREAD GTYHRHTQLL TFVR
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