Gene Rmar_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0936 
Symbol 
ID8567575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1064312 
End bp1065463 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content63% 
IMG OID 
Productoxygen-independent coproporphyrinogen III oxidase 
Protein accessionYP_003290218 
Protein GI268316499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCA TCTACCTTCA CATTCCTTTT TGCAAGCAGC GCTGCATTTA CTGTGATTTT 
TACTTCGTCA CGGGCCAGCG GCTGCACCCC ACCTTCGTGC AGGCGCTCTG CACCGAGATC
GAATACTACG GCCAGCTCTA CGGCCGCCTG GAGCCGATCG AGACGATCTA CTTCGGCGGC
GGTACCCCTT CGCGCCTTTC GCTCGAAGAA GTCGCCCGCG TGCTGAACGA GCTCTACCGG
TATTTCGACC TGTCGGCGCT GCAGGAGGTG ACGTTCGAGG TCAATCCGGA AGACGCCTCG
CGCGACTATC TGAGCGGGCT GCACAGCCTG GGCATCAACC GGCTCTCGAT CGGGGTGCAG
TCGTTCTACG AGGCCGATCT GCGCTTCATG AACCGGGCGC ACACGGCCGA GCAGGCCGAG
GCGGCCATCG AAAACGCCCG CCGCGCCGGC TTTGAAAACT TCAACGTCGA TCTGATTTTC
GGACTGCCCG ACCAGCCGCT CGAATACTGG ATGGCCAACC TGCAGAAGGT GGCCGATCGC
GACATTCCAC ACGTTTCGAC CTACAGCCTG ACGATCGAAC CGCGTACCGT GCTCTACAAG
CAGGTCGAAC GTGGTCTGGT GCAGCCGGCC GACGAGGAGA CCTACCGGGC CTGCTACGAC
TTTGCGATGG AGTATCTGGA GGCGCGGGGC TATGAGCACT ACGAGATCTC GAACTTCGCG
CGGCCGGGTT ATCAGTCGCG CCACAACCAC ACGTACTGGC GGCACGGCAA CTACCTGGGC
TTCGGACCCT CGGCCCACTC GTTCTGGTGG GGCCAGCTAC CCGAGCCGGG CGCCTACCGG
TGGGCCAACG TGCGCAACCT CCGCCGCTAC GAAGCGCTGC TGGCCCAGCA CCACCTGCCG
CTGGAGTTTC GCGAAGGACT CTCCTACGAC CAGCTCGCCG AAGAATATCT GTACCTGCGG
CTTCGCACGG CCGAGGGGCT GGACCTGGAT CATTACGCCG AACGCTACGG GGTGGACCTG
CTCAGCGAAC GGCTGGACGA GCTGGCCGAA CTGGAAGCCG AGGGGCTGAT CGAACCCATC
CGCAACGGGA AGCTCCGTCT GAGCCGGAAA GGCCGGCACG TCTGCGACGC CATCGTCGCC
CGCCTGCTCT GA
 
Protein sequence
MAGIYLHIPF CKQRCIYCDF YFVTGQRLHP TFVQALCTEI EYYGQLYGRL EPIETIYFGG 
GTPSRLSLEE VARVLNELYR YFDLSALQEV TFEVNPEDAS RDYLSGLHSL GINRLSIGVQ
SFYEADLRFM NRAHTAEQAE AAIENARRAG FENFNVDLIF GLPDQPLEYW MANLQKVADR
DIPHVSTYSL TIEPRTVLYK QVERGLVQPA DEETYRACYD FAMEYLEARG YEHYEISNFA
RPGYQSRHNH TYWRHGNYLG FGPSAHSFWW GQLPEPGAYR WANVRNLRRY EALLAQHHLP
LEFREGLSYD QLAEEYLYLR LRTAEGLDLD HYAERYGVDL LSERLDELAE LEAEGLIEPI
RNGKLRLSRK GRHVCDAIVA RLL