| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0903 |
|---|
| Symbol | |
|---|
| ID | 8567541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1022247 |
|---|
| End bp | 1023557 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_003290185 |
|---|
| Protein GI | 268316466 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.331424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGA TTGCCTGTGT GCTCTGTGTA GTGGGCCTGC TGGTGACAGG CGTGCGGCAT
GCAGTGGCCC AGCCGCTTCT GACCCTCGAA GAAGCGCTCG AACTGGCCCG CCGACGCAAC
CCTTCGGTGC AGGTGAGCCG GCTGCAGGCC CGGCAGGCCC AGAACGATTA TGCGCTCGGG
ACGGCGGGCT TCTGGCCGCA GCTTTCCTTC AGCATGGGAT GGACCGGAAG CCTGACCAAC
ACCCGGCAGC AGTTTCTGAC CAACCCGGAA CCGGTCGTGC GGAACGGCGC GCAGGCGCGG
CGGCTGGATG GCGGCCTGCA GCTGCGCTGG ACGATTTTCG ATGGACTGGG GCAGTGGGCC
CGTTATCGCC GGCTCGAGGC CGAGGTCACC CGGGCGGAAG CCGACGTCCG CGCCACCACC
AATGCGCTGC TGGCCGAGGT CGCCATCGCC TACTACAATC TGGTGCGGCT CCAACAGCAG
CGCGAGGTGC TCGCATCGAC CGTGGCGATT TCGACCGAGC GTCTGGAAAT TGCCCAGATG
CGCTACAATC TGGGGGCCGC CTCCCGCCTG GAAGTGAGTC GGGCCCAGGT CGATCTCAAT
GCGGACCAGG CCGCCTTGCT GCGGCAGGAA GTGCTGCTGG CGCAGGAACG GGCCGCGTTC
AACGAACTGC TCGGGCGCGA TCCCGGAACG CCTTTCCGCA CCGTCGATTC GATCCGCGTC
GATCCTTCGC TGACGCTTCC GGCCCTGCAC GAGGCGGCCC GGGAGCGCAA TCCCATGTTG
CAACAGGCCC GGGCTGCGGT GTCCCTGACG CACCATGCCC TGCAGGAACT GCGAGCCGAG
CGGTGGCCGC AGCTGGATCT GATCGCCGGC TACACGTACA CCAACCTGCA TTCCGAAAGC
GGCTTCATGC AGGAAAGCCG CACCTTCGAC TTCAGCTACG GACTGAGCCT GTCGCTGACG
CTGTTTGACG GCTGGAATCG GCGACGCCGC ATAGAAAATG CCCGGCTGAA CTACCAGGCC
AATCAGGTCC AGCTGGAGCA GGTGCAACGA TCGATCGAAA CGGCGCTGGC CCAGCAGTAC
GCCGCCTATC AGCGCTACCT GGAGCTGATT ACGCTGGAGC AGGACAACCT GGAGGCCGCC
CGTCTGAACG TGGAGGTGGC GCTGGAGCAG TTTCGACTGG GAACGATCTC TTCGGTGGAA
TTGCGAGAAG TGCAGCAGGC CCTGCTGCAG GCGGAAGAGC GTCTGGTCAA CGCCCGCTAC
GAGGCCAAGG TCGCCGAAAT TCGCCTGCGC CAGCTGGCCG GCCAGTTCTG A
|
|---|
| Protein sequence | MSRIACVLCV VGLLVTGVRH AVAQPLLTLE EALELARRRN PSVQVSRLQA RQAQNDYALG
TAGFWPQLSF SMGWTGSLTN TRQQFLTNPE PVVRNGAQAR RLDGGLQLRW TIFDGLGQWA
RYRRLEAEVT RAEADVRATT NALLAEVAIA YYNLVRLQQQ REVLASTVAI STERLEIAQM
RYNLGAASRL EVSRAQVDLN ADQAALLRQE VLLAQERAAF NELLGRDPGT PFRTVDSIRV
DPSLTLPALH EAARERNPML QQARAAVSLT HHALQELRAE RWPQLDLIAG YTYTNLHSES
GFMQESRTFD FSYGLSLSLT LFDGWNRRRR IENARLNYQA NQVQLEQVQR SIETALAQQY
AAYQRYLELI TLEQDNLEAA RLNVEVALEQ FRLGTISSVE LREVQQALLQ AEERLVNARY
EAKVAEIRLR QLAGQF
|
|---|
| |