| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0869 |
|---|
| Symbol | |
|---|
| ID | 8567507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 979064 |
|---|
| End bp | 980035 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | DNA-directed RNA polymerase, alpha subunit |
|---|
| Protein accession | YP_003290154 |
|---|
| Protein GI | 268316435 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.292273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAAT TGCCCGAAGG TGTTCGGGTG GAAGAGGCGA CGGAAACGTT CGGGCGTTTT
GTGGTGCAGC CGCTCGAGCG CGGCTATGGC GTGACGATCG GCAACGCGCT CCGGCGCGTG
CTGCTTTCTT CGCTGCCGGG CGTTGCCATT ACGGCCGTCC GAATCGACGG CGTGCAGCAC
GAATTCTCGA CGATTCCGGG CGTCACCGAA GACGTCGCGG AAATTATCCT GAACCTGAAG
GGCGTTCGCT TCAAGGCGAA GGACACCACC GACGCGAACA TCCGGCTCTC GCTCAAAGGG
CCGCACGTGT GGACGGCCCG CGACATCGGC GAGGCCACCA GCCACTACGA GGTGCTGAAT
CCGGACCACT ACATCGCCAC GCTGGCCGAA GGCGCCGAGG TGAACCTCGA GCTGCGCATG
GGGCGCGGGC GCGGCTACGT GCCGGCCGAG GAAAACAAGC TGCCGGATGA TCCGATCGGG
GTGATCGCCA TCGACGCGAT CTTCACGCCC ATCAAGAACG TGCGCTACAC GATCAAACCC
ACGCGCGTGG GCCAGAAGAT CGAGTACGAG CGTCTGGAAC TGGAAATTAC CACGGACGGC
TCGGTCTCGC CCGAAGAAGC ACTCGTGCAG GCGGCCACGA TCCTGCGCGA TCATATCAAC
CTTTTCATCA CGATGGAGAG CGAGCCGCAG CCCGAGGTCA AGAAGAAAGA GGTCGACGCC
GAGGTGCAGC GCATCCGCGA GCTGCTCTCG CAGCCGGTCG ATGAACTCGA CCTGTCGGTG
CGGGCGCAGA ACTGCCTCAA GGCGGCCAAC ATCCGCACGA TCGGCGATCT GGTGCGACGG
CAGGAGTCCG AAATGCTCAA GTTCCGCAAC TTCGGCCGCA AGTCGCTCCA GGAGCTGATC
GCCGTGCTGG AGGAGCGCGG GCTGCACTTT GGCATGGACG TCGACAAGTA CCTTGAGGGA
GCCGAGAGCT GA
|
|---|
| Protein sequence | MVQLPEGVRV EEATETFGRF VVQPLERGYG VTIGNALRRV LLSSLPGVAI TAVRIDGVQH
EFSTIPGVTE DVAEIILNLK GVRFKAKDTT DANIRLSLKG PHVWTARDIG EATSHYEVLN
PDHYIATLAE GAEVNLELRM GRGRGYVPAE ENKLPDDPIG VIAIDAIFTP IKNVRYTIKP
TRVGQKIEYE RLELEITTDG SVSPEEALVQ AATILRDHIN LFITMESEPQ PEVKKKEVDA
EVQRIRELLS QPVDELDLSV RAQNCLKAAN IRTIGDLVRR QESEMLKFRN FGRKSLQELI
AVLEERGLHF GMDVDKYLEG AES
|
|---|
| |