Gene Rmar_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0828 
Symbol 
ID8567466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp945153 
End bp945959 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID 
Productperiplasmic binding protein 
Protein accessionYP_003290113 
Protein GI268316394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTTC CGCGTGAACT GACCGACGCA CGCGGCCGCA CGATCCGTCT TGACCGTCCA 
CCCCGCCGCA TCGTCTCGCT CGTGCCCAGC CTGACCGAGC TGCTGGCGGC GCTCGAGCTG
GATGAGGCCG TCGTGGGACT GACCCGTTTC TGCGTGCGCC CGCCCGACTG GAAGCGTCGA
AAAACGATCG TGGGCGGCAC CAAGCAGGTC AACTACGATC GGCTGCTGAG TCTGCAGCCC
GAGCTGGTCC TGGCCAACCT GGAGGAGAAC ACCCGCGAAA TCGTCGAGAC GCTGGATCCG
CATGTGCCTG TTTTCGTCAC CCACGTACGA ACGCTGGAGG AAGCGCTGCA GATGATTCGC
CAGGTCGGCT ACCTGACCGG CACCGAAACG GCCGCCGAAG CGCTGGCCAC TACCATTGCC
GAACGCTTTG CGGCGTTGCC GACCTATCCG CCCCGGCGCA CGCTCTACCT GATCTGGCGC
GATCCGTACA TGAGCGTCGG CCACGACACG TTCATCCACG ACGTGCTCCG GCGTGGAGGC
TTCGAGAACG TGTGTGCCGA CCGGACGCGC TATCCGGTGC TGACGCCCGA GGAAATCCGC
GCACTGCACC CCGAAGTCGT GCTGCTCAGC AGCGAACCCT ATCCGTTCAG GGAAAAGCAC
ATTGAGGAGC TACGGCCGCT GTGTCCCGAG GCCACGTTCC TGCTGGTCGA CGGACAGCCC
TTCTCCTGGT ACGGCGCCCG GTTGCTGGCA ACGCCCGCCT ATCTGAGACA TCTGCAGGCC
CAACTGGCGA CCCGGTTGCC CTCTTAA
 
Protein sequence
MTFPRELTDA RGRTIRLDRP PRRIVSLVPS LTELLAALEL DEAVVGLTRF CVRPPDWKRR 
KTIVGGTKQV NYDRLLSLQP ELVLANLEEN TREIVETLDP HVPVFVTHVR TLEEALQMIR
QVGYLTGTET AAEALATTIA ERFAALPTYP PRRTLYLIWR DPYMSVGHDT FIHDVLRRGG
FENVCADRTR YPVLTPEEIR ALHPEVVLLS SEPYPFREKH IEELRPLCPE ATFLLVDGQP
FSWYGARLLA TPAYLRHLQA QLATRLPS