Gene Rmar_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0790 
Symbol 
ID8567428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp911519 
End bp913120 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content64% 
IMG OID 
Productflagellar M-ring protein FliF 
Protein accessionYP_003290076 
Protein GI268316357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0592385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAGC AGCTCAAGCA GTTTCTGAGT CGGCTCTCTC CTGGCCAGCG GCTGGCGCTG 
GGCGCCGTTA CGATCGGCAG CATTCTGTTG CTGCTGGGCA TTGCCTACTG GGCCGGACGG
CCGGAATATG CCCTGTTGTT CGGCGGCCTT TCCCCCTCGG ATGCCAGTCG GATTGTCGAG
ACGCTCCAGG AAGAGAACGT CCCCTATCAG CTCAAAGAAG GCGGCACGGC CATCTGGGTC
CCGCGCGATC GCGTCTACGA ACTGCGCCTC CGGTTTGCCG GAGAAGGGCT GGTCAGCGAC
GGACCGGTCG GGTACGAGCT CTTCGACCAG AACACGCTCG GCATGACCGA CTTCATGCAG
CGGCTGAATT ACAAACGGGC GCTGGAGGGC GAGCTGGCCC GCACGATCAT GAGCCTGCAG
CAGGTCGAGC TGGCCAAGGT CCATCTGGTG TTACCGGAGC GGAGCCCGTT TCGCGAAACC
CAGGTGGCTC CCAGTGCTTC GGTGCTGCTC TCACTCAAAA GCGGCGCGCG CCTGACCGAA
GAGCAGATCG ATGGCATCAC GGCGCTGGTG GCCGGTGCCG TCGAAGGGCT CGATCCGGCC
AACGTGACCG TGCTGGATGC CCGGGGCAAC CTCCTCTCCA ACCCGGACGC CGGCAACGCC
GAACTCGCCC TCAGCAGCAC ACAGCTCAAG CTACGTCAGG CGCTCGAGGC CCATCTGACC
GAAAAAGGCC AGTCCATGCT CGACCGCGTG CTGGGCCCCG GTAATGCCAT CGTGCGTGTT
TCGGCCACGC TGAACTTCGA CCAGGCGGTT ACCGAGCGAC AGCTCATCGA TCCCGAAAGC
GCCACGGTCA TCAGCGAGGA ACGCCTCGAA GAGGCCGGCA CCGGGGGCGA AGGGTCTTCG
GCCAGCTCCA TGGTGCGCAA CTATGAACTG AGCCGTACGG TCGAACGCAT CCAGCAAAAC
GGCGGCGACG TCGAATACCT GACCGTATCG GTCATCCTCA ACCAGCGCTT CGAAGAAGGC
CCGGACGGCA CGCCGCAGCC ACGCCCCTAC ACCGAAGACG AGCTCCGGGA GATCGAAGAG
CTGGTCAAAA ACGCCGTCGG TTTCCGGCCG GAGCGGGGCG ACCGCTTTGC CATTCATCAG
ACGCGCTTCG ACACGCAGAT CGACGACCAG ATCGCGCAGG AACTCCGCGA ACAGCGCCGT
CAGGAGCAAC TCAATCTCTA CCTGCGCTAC GGCCTCATGG TGCTGGCCCT GGGCCTGGCC
GTCTGGCTGC TGCGCGCGCT GGTCCGTCGC ATGGGCGAGC TGGCCGGCGA GACGCAGGTG
CTCATCGGCC GCGTCGACCA GGAGCATGGA GCGCTCGGTG CACCCGAAGG CGCTTCGGGC
GCGCTGCAGG GCAAAGCGGT GCCCGGTCTG GAATCCGGCG AATCCGACGA GGAGCTGGTT
TTGATCGACG ACATCTACAC CAGTCGGCTA TCGGCCGAAG CCAAGGCCCG CCTGAAGGCC
AAGCACATCC TGTTCGAGGA AGTCCAGAAA CAGGTCAACG AAAAACCGGA AGAGGCGGCC
GAAATCATCC GGAGCTGGCT GGTAGCCGAC ATGCAGGATT GA
 
Protein sequence
MFEQLKQFLS RLSPGQRLAL GAVTIGSILL LLGIAYWAGR PEYALLFGGL SPSDASRIVE 
TLQEENVPYQ LKEGGTAIWV PRDRVYELRL RFAGEGLVSD GPVGYELFDQ NTLGMTDFMQ
RLNYKRALEG ELARTIMSLQ QVELAKVHLV LPERSPFRET QVAPSASVLL SLKSGARLTE
EQIDGITALV AGAVEGLDPA NVTVLDARGN LLSNPDAGNA ELALSSTQLK LRQALEAHLT
EKGQSMLDRV LGPGNAIVRV SATLNFDQAV TERQLIDPES ATVISEERLE EAGTGGEGSS
ASSMVRNYEL SRTVERIQQN GGDVEYLTVS VILNQRFEEG PDGTPQPRPY TEDELREIEE
LVKNAVGFRP ERGDRFAIHQ TRFDTQIDDQ IAQELREQRR QEQLNLYLRY GLMVLALGLA
VWLLRALVRR MGELAGETQV LIGRVDQEHG ALGAPEGASG ALQGKAVPGL ESGESDEELV
LIDDIYTSRL SAEAKARLKA KHILFEEVQK QVNEKPEEAA EIIRSWLVAD MQD