Gene Rmar_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0716 
Symbol 
ID8567353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp827760 
End bp828923 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content70% 
IMG OID 
Productaminotransferase class V 
Protein accessionYP_003290002 
Protein GI268316283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGAC CGGTTTATCT GGACTACAAC GCCACGACCC CCGTCGATCC GCGGGTGCTG 
GAGCGCATGC TGCCGTACTT TACCGAGCGC TTCGGCAATC CGGCCAGCAA GGGCCACACC
TACGGCCTGG AAGCCGAAGC GGCCGTCGAG GTCGCCCGTG AGCAGGTGGC GGCCCTGCTG
GGGGCCGAGC CGGACAGCCT GATCTTCACC AGCGGCGCCA CCGAAGCGCT GAACCTGGCC
ATCAAGGGGG TGGCCGAGGC TTCCCGACAC CGGGGGCAGC ATATCGTGAC AGTCCAGACC
GAGCACGCGG CCGTGCTCGA AGCCTGCCGG GCCCTGGAAC GCAGGGGCTG GCAGGTGACC
TACCTGCCCG TCGATGCGCA GGGGCGGCTG GATCCGGACG CGCTGGAGAC GGCACTGACG
CCGCAGACCG TCCTGGCGGC CGTCATGTGG GCCAACAACG AAACGGGCGT GCTGCATCCC
ATTGAGGAAG TTGCCCGACG CACGCAGGCC CACGGTGTGC CGCTCCTGGT CGATGCCACG
CAGGCCGTGG GGAAGATTCC GGTCTCGGTC GAGGGGATCG ATCTGCTGGT CTGCTCGGCG
CACAAGTTCT ACGGCCCCAA AGGTGCCGGC GTGCTCTACG TACGCCGTCG CCCGCCGCTG
CGCCTGGTGC CCCTGCTGGA CGGTGGCGGG CACGAGCAGG GGTTGCGCAG CGGGACGTTG
AATGTGCCGG CCATCGTCGG CATGGGAGCG GCCGCCGAAC TGGCCGCCCG GGAAATGGCC
GACGAAAGCC GCCGCCTGCG ACACCTGCGC GATCGGCTGG AGCGGGAGCT GCAGGCTGCT
TTGCCCGACG TCCGCATCAA CGGAGCGCAG GCGCCACGGC TACCCCAGAC GAGCAGCGTC
ACGATCCCGG GCGTTCGGGC CGACCGCCTG CTGACCACCG TGCGCACGCT GGCACTTTCG
GCCGGCAGCG CCTGCGGTTC GGGTCGCGGC AAGCCCAGCC ACGTGCTCCG CGCCATGGGT
CTCAGTGAGG CCGAGGCGCA ATGCACGATC CGCATCAGCC TGGGACGTTT CACCACCGAG
GCCGACATCG ACGAGGCCCT TGAACAACTA ACGGCGGCCG TACGTCGGCT TCGCCAGCGC
TCCGTCGCCA CGTCAACCAC CTGA
 
Protein sequence
MRRPVYLDYN ATTPVDPRVL ERMLPYFTER FGNPASKGHT YGLEAEAAVE VAREQVAALL 
GAEPDSLIFT SGATEALNLA IKGVAEASRH RGQHIVTVQT EHAAVLEACR ALERRGWQVT
YLPVDAQGRL DPDALETALT PQTVLAAVMW ANNETGVLHP IEEVARRTQA HGVPLLVDAT
QAVGKIPVSV EGIDLLVCSA HKFYGPKGAG VLYVRRRPPL RLVPLLDGGG HEQGLRSGTL
NVPAIVGMGA AAELAAREMA DESRRLRHLR DRLERELQAA LPDVRINGAQ APRLPQTSSV
TIPGVRADRL LTTVRTLALS AGSACGSGRG KPSHVLRAMG LSEAEAQCTI RISLGRFTTE
ADIDEALEQL TAAVRRLRQR SVATSTT