Gene Rmar_0711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0711 
Symbol 
ID8567348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp823440 
End bp824675 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content66% 
IMG OID 
Producthydroxymethylbutenyl pyrophosphate reductase 
Protein accessionYP_003289997 
Protein GI268316278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGGC AGTTTGACAT TCCGGTTTTT TATCGCAGCC CGATCATCTC GCGCGTCAAG 
GAGGCCCGCC GTCGCCAGGA TCCGCGCAAG AAGGACTTTT CGCCGACGGT GCTGGACTTC
GGCCCGGTTC GCTTCAAGCT GGCGCGGCAC TTCGGGTTCT GCTACGGGGT GGAACAGGCC
GTCGAGATCG CCTACCGGGC GCTGGAGGAA AATCCGGGCC GTCGGATTTT TCTGCTCTCG
GAGATGATCC ACAATCCGCA CGTCAACCGC GATCTGGAAC AACGGGGCGT GCGCTTTCTG
CGGACCACGC GCGGTGAGCA GCTCATCCCG TTCGATGTGC TCCGGCCCGA CGACATCGTG
ATCATTCCCG CCTTCGGCAC GACGCCTGAG ATCGAAGCCG AGCTGGCCGC CCGGGGTGTG
GACGTGCGCC GCTACGACAC GACCTGTCCG TTCGTCGAGA AAGTGTGGAA ACGCAGCAGC
CAGCTTGGCC AGCGCGGCTA CACGATCGTC ATTCACGGCA AACGCTACCA CGAGGAGACG
CGGGCGACGT TCGCGCGGGC GGCCCGCGAG GCGCCCGTCG TCGTCGTGCG CGACCTGGAA
GAGGCGGCCG ATCTGGCCCG TGTCATCCGT GGCGAGGCCG ACGCCGCGTT CTTCTACGAG
CGGTTTCACG ACCGCTACTC GGAAGGCTTC GACCCGGAGC GCGACCTGGT GCGCATCGGT
GTGGTGAACC AGACTACCAT GCTGGCCACC GAGACGCAGG CGATCGCCGA GCTGCTGCGC
CAGGCCATGA TCGACCGCTA CGGACCGGAA AACCTGCACG AACACTTCGC CGACACGAGC
GATACGCTCT GCTACGCCAC GCACGAAAAC CAGCAGGCCA CGCGGGCACT GATCGACTCG
GGCGGCGACC TGGCGCTGGT AGTGGGCGGC TACAACTCGT CGAATACGAG CCATCTGGTG
GAGCTGTGCG CCGAGCGCAT GCCCACCTAC TTCGTGAAAG GGCCGGAGGA GCTGCTTTCG
CCCGCACGCA TCCGGCATTA CGACCTGGAG CTCGGGGCCG TTCGGGAAAC CGAAAACTGG
CTGCCCGCGC ACCGGCCCGT CGAGATCGTG CTGACGGCGG GGGCTTCGTG CCCGGACGCG
CTGCTGGAAG CCGTATTGCA GCGTGTGCTG AGCTGGTTCG AGCCGGTGCG GCCCGTCGAG
GAAGTGCTGG CCCCGTATCT GGAAGCCATC GCCTGA
 
Protein sequence
MPRQFDIPVF YRSPIISRVK EARRRQDPRK KDFSPTVLDF GPVRFKLARH FGFCYGVEQA 
VEIAYRALEE NPGRRIFLLS EMIHNPHVNR DLEQRGVRFL RTTRGEQLIP FDVLRPDDIV
IIPAFGTTPE IEAELAARGV DVRRYDTTCP FVEKVWKRSS QLGQRGYTIV IHGKRYHEET
RATFARAARE APVVVVRDLE EAADLARVIR GEADAAFFYE RFHDRYSEGF DPERDLVRIG
VVNQTTMLAT ETQAIAELLR QAMIDRYGPE NLHEHFADTS DTLCYATHEN QQATRALIDS
GGDLALVVGG YNSSNTSHLV ELCAERMPTY FVKGPEELLS PARIRHYDLE LGAVRETENW
LPAHRPVEIV LTAGASCPDA LLEAVLQRVL SWFEPVRPVE EVLAPYLEAI A